Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:33369970..33372614-chr7:33374377..33376090,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10486521	0.83[CEU][hapmap]
rs17398251	0.83[CEU][hapmap]
rs17398949	1.00[CEU][hapmap];0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17473365	0.83[CEU][hapmap]
rs17475325	0.83[CEU][hapmap]
rs17786463	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs2109525	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs41323949	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs56268815	0.84[EUR][1000 genomes]
rs60418513	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61706828	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs73099260	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73099265	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs73101663	0.87[EUR][1000 genomes]
rs73101665	0.87[EUR][1000 genomes]
rs73101668	0.87[EUR][1000 genomes]
rs73101671	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73101690	0.86[EUR][1000 genomes]
rs73101699	0.84[EUR][1000 genomes]
rs73103504	0.83[EUR][1000 genomes]
rs73103508	0.83[EUR][1000 genomes]
rs73103514	0.83[EUR][1000 genomes]
rs73103533	0.84[EUR][1000 genomes]
rs73103557	0.83[EUR][1000 genomes]
rs7779232	1.00[CEU][hapmap];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv606610	chr7:33218763-33486316	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1016416	chr7:33241443-33559477	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv916660	chr7:33272493-33506384	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:33355200-33419600	Weak transcription	Primary T cells from cord blood	blood
2	chr7:33362200-33404400	Weak transcription	Ovary	ovary
3	chr7:33362200-33404800	Weak transcription	Fetal Lung	lung
4	chr7:33366600-33384000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr7:33370600-33396200	Weak transcription	Adipose Nuclei	Adipose

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