Variant report

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11984995	1.00[CEU][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs11989629	1.00[CEU][hapmap]
rs11989752	1.00[CEU][hapmap]
rs11992298	1.00[CEU][hapmap]
rs11993217	1.00[CEU][hapmap]
rs11993687	1.00[CEU][hapmap]
rs11997399	1.00[CEU][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16934738	0.87[CEU][hapmap]
rs16934792	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16934892	1.00[CEU][hapmap]
rs16934901	0.82[CEU][hapmap]
rs16934903	1.00[CEU][hapmap]
rs16934930	1.00[CEU][hapmap]
rs16934945	1.00[CEU][hapmap]
rs16934954	1.00[CEU][hapmap]
rs17388090	1.00[CEU][hapmap]
rs2591008	0.82[CEU][hapmap]
rs2676638	0.82[CEU][hapmap]
rs55731817	0.83[AMR][1000 genomes]
rs55821789	0.83[AMR][1000 genomes]
rs57624575	0.80[EUR][1000 genomes]
rs58619671	1.00[ASN][1000 genomes]
rs60577322	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6651316	1.00[CEU][hapmap]
rs6986385	1.00[CEU][hapmap]
rs6987972	1.00[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs6992870	1.00[CEU][hapmap]
rs7012051	1.00[CEU][hapmap]
rs7013783	1.00[CEU][hapmap]
rs7014834	1.00[CEU][hapmap]
rs7015275	1.00[CEU][hapmap]
rs7818845	1.00[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs984415	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs984878	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9987198	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948687	chr8:69041121-69642540	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv890981	chr8:69413110-69534542	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv890984	chr8:69482825-69556111	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69512600-69522400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:69514600-69519800	Weak transcription	Aorta	Aorta

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