Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10107881	1.00[ASN][1000 genomes]
rs10283310	1.00[ASN][1000 genomes]
rs11994723	1.00[ASN][1000 genomes]
rs16874196	0.83[EUR][1000 genomes]
rs16874206	0.83[EUR][1000 genomes]
rs16874228	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16874237	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28699587	1.00[ASN][1000 genomes]
rs28711258	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55946450	1.00[ASN][1000 genomes]
rs57194187	1.00[ASN][1000 genomes]
rs59536759	1.00[ASN][1000 genomes]
rs59854028	1.00[ASN][1000 genomes]
rs61105228	1.00[ASN][1000 genomes]
rs61553007	1.00[ASN][1000 genomes]
rs6986205	1.00[ASN][1000 genomes]
rs7010241	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73301406	1.00[ASN][1000 genomes]
rs73698647	1.00[ASN][1000 genomes]
rs7818310	1.00[ASN][1000 genomes]
rs7824769	1.00[ASN][1000 genomes]
rs7825353	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv611840	chr8:106913294-107265915	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv891263	chr8:107210629-107239780	Enhancers Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107225400-107231000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr8:107228000-107230800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:107230000-107232200	Enhancers	Osteobl	bone
4	chr8:107230000-107232400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:107230000-107232600	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:107230200-107231600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr8:107230200-107232400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:107230400-107232000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:107230400-107232000	Enhancers	Colon Smooth Muscle	Colon
10	chr8:107230400-107232400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr8:107230400-107232600	Enhancers	Fetal Heart	heart
12	chr8:107230600-107232400	Enhancers	Fetal Stomach	stomach

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