Variant report

Variant	rs7826750
Chromosome Location	chr8:118109342-118109343
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10107643	0.93[ASN][1000 genomes]
rs10505310	0.85[ASN][1000 genomes]
rs10505312	0.86[ASN][1000 genomes]
rs10505313	0.92[ASN][1000 genomes]
rs10955804	0.88[ASN][1000 genomes]
rs11989800	0.89[EUR][1000 genomes]
rs13257552	0.92[EUR][1000 genomes]
rs13269408	0.93[ASN][1000 genomes]
rs13279687	0.92[ASN][1000 genomes]
rs13281296	0.87[ASN][1000 genomes]
rs16889365	0.87[EUR][1000 genomes]
rs16889402	0.91[EUR][1000 genomes]
rs17745149	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17813200	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1876080	0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1910895	0.87[EUR][1000 genomes]
rs35228127	0.95[ASN][1000 genomes]
rs35875446	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35934480	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4876696	0.87[EUR][1000 genomes]
rs4876703	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57686953	0.91[EUR][1000 genomes]
rs6469673	0.89[EUR][1000 genomes]
rs6469675	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6469676	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6469677	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6982630	0.93[ASN][1000 genomes]
rs6982713	0.92[EUR][1000 genomes]
rs6983495	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6984249	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6998536	0.93[ASN][1000 genomes]
rs7000505	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7007057	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7014190	0.98[ASN][1000 genomes]
rs7015397	0.90[ASN][1000 genomes]
rs7017296	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7833193	0.88[EUR][1000 genomes]
rs7833734	0.87[EUR][1000 genomes]
rs868651	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs924922	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530386	chr8:117509968-118391406	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	esv3423289	chr8:118108796-118111544	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
3	esv3427646	chr8:118108971-118111319	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118108800-118118400	Weak transcription	Pancreatic Islets	Pancreatic Islet

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