Variant report

Variant	rs7907860
Chromosome Location	chr10:45583837-45583838
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs11239349	0.91[ASN][1000 genomes]
rs12252994	1.00[ASN][1000 genomes]
rs12569983	0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12570593	0.87[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs17157448	1.00[AFR][1000 genomes]
rs28510585	0.92[ASN][1000 genomes]
rs34564821	0.87[AMR][1000 genomes]
rs55648726	0.93[ASN][1000 genomes]
rs58684533	0.84[AFR][1000 genomes]
rs58720456	0.89[AFR][1000 genomes]
rs60197913	0.93[ASN][1000 genomes]
rs7072240	1.00[AFR][1000 genomes]
rs7074762	1.00[YRI][hapmap]
rs73279386	0.84[AFR][1000 genomes]
rs73285555	0.84[AFR][1000 genomes]
rs73285558	0.84[AFR][1000 genomes]
rs73287510	0.84[AFR][1000 genomes]
rs73287546	0.84[AFR][1000 genomes]
rs73287549	0.84[AFR][1000 genomes]
rs73287562	0.84[AFR][1000 genomes]
rs73287567	0.95[AFR][1000 genomes]
rs73287569	0.95[AFR][1000 genomes]
rs73287573	1.00[AFR][1000 genomes]
rs73287578	1.00[AFR][1000 genomes]
rs73287579	1.00[AFR][1000 genomes]
rs73287582	1.00[AFR][1000 genomes]
rs73287584	1.00[AFR][1000 genomes]
rs73287589	1.00[AFR][1000 genomes]
rs73287599	1.00[AFR][1000 genomes]
rs73287601	1.00[AFR][1000 genomes]
rs73289603	1.00[AFR][1000 genomes]
rs73289605	1.00[AFR][1000 genomes]
rs73289610	1.00[AFR][1000 genomes]
rs73289682	1.00[AFR][1000 genomes]
rs73289688	1.00[AFR][1000 genomes]
rs73289692	1.00[AFR][1000 genomes]
rs73289694	0.95[AFR][1000 genomes]
rs73289697	0.95[AFR][1000 genomes]
rs73291604	0.95[AFR][1000 genomes]
rs73291615	0.89[AFR][1000 genomes]
rs73291619	0.93[ASN][1000 genomes]
rs7902733	1.00[AFR][1000 genomes]
rs7906497	1.00[AFR][1000 genomes]
rs9663396	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831848	chr10:45490176-45667670	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	nsv971917	chr10:45547355-45595482	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2750897	chr10:45550145-45820136	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45583200-45586200	Weak transcription	Pancreas	Pancrea

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