Variant report

Variant	rs7910031
Chromosome Location	chr10:45176497-45176498
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:45169027..45172416-chr10:45173196..45176853,3	K562	blood:

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs10047285	0.93[ASN][1000 genomes]
rs10508887	0.93[ASN][1000 genomes]
rs10736830	0.93[EUR][1000 genomes]
rs10751358	0.93[EUR][1000 genomes]
rs1077995	0.92[ASN][1000 genomes]
rs10793552	0.94[EUR][1000 genomes]
rs10793554	0.93[ASN][1000 genomes]
rs10900092	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10900094	0.93[ASN][1000 genomes]
rs10900097	0.93[ASN][1000 genomes]
rs10900098	0.93[ASN][1000 genomes]
rs10900099	0.92[ASN][1000 genomes]
rs10900104	0.92[ASN][1000 genomes]
rs11239200	0.90[ASN][1000 genomes]
rs11239202	0.93[ASN][1000 genomes]
rs11239203	0.93[ASN][1000 genomes]
rs11239211	0.92[EUR][1000 genomes]
rs11239212	0.93[ASN][1000 genomes]
rs11239220	0.93[ASN][1000 genomes]
rs11239227	0.91[ASN][1000 genomes]
rs11239230	0.92[ASN][1000 genomes]
rs11816488	0.98[ASN][1000 genomes]
rs12245478	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12266496	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12570975	0.91[ASN][1000 genomes]
rs1325165	0.92[ASN][1000 genomes]
rs1480603	0.93[EUR][1000 genomes]
rs1600614	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs60235930	0.93[ASN][1000 genomes]
rs6593436	0.95[EUR][1000 genomes]
rs7068119	0.93[EUR][1000 genomes]
rs7071173	0.92[ASN][1000 genomes]
rs7071236	0.93[ASN][1000 genomes]
rs7077918	0.93[ASN][1000 genomes]
rs7081991	0.92[ASN][1000 genomes]
rs7082194	0.93[ASN][1000 genomes]
rs7083361	0.93[ASN][1000 genomes]
rs7085278	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7088688	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7091797	0.92[ASN][1000 genomes]
rs7097094	0.93[EUR][1000 genomes]
rs7098668	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7100810	0.92[ASN][1000 genomes]
rs73285791	0.93[ASN][1000 genomes]
rs73287678	0.92[ASN][1000 genomes]
rs7893447	0.93[EUR][1000 genomes]
rs7902711	0.93[ASN][1000 genomes]
rs7905953	0.92[ASN][1000 genomes]
rs7907450	0.91[ASN][1000 genomes]
rs7907854	0.94[EUR][1000 genomes]
rs7920528	0.90[ASN][1000 genomes]
rs879133	0.93[ASN][1000 genomes]
rs9326520	0.93[ASN][1000 genomes]
rs999473	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422287	chr10:45044161-45257684	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv831843	chr10:45084703-45280032	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv525947	chr10:45163568-45182316	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45171400-45177200	Weak transcription	Fetal Lung	lung
2	chr10:45172800-45177800	Weak transcription	Brain Germinal Matrix	brain
3	chr10:45175200-45177600	Weak transcription	Fetal Muscle Leg	muscle
4	chr10:45176200-45178200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr10:45176200-45185800	Weak transcription	Aorta	Aorta
6	chr10:45176400-45178000	Weak transcription	Skeletal Muscle Female	skeletal muscle

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