Variant report

Variant	rs7921467
Chromosome Location	chr10:97344243-97344244
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10882639	0.81[CHB][hapmap];0.92[JPT][hapmap];0.81[ASN][1000 genomes]
rs11188374	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11188375	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11188385	0.89[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs12098522	0.84[JPT][hapmap]
rs1933168	0.83[JPT][hapmap]
rs2105359	0.84[JPT][hapmap]
rs3829157	0.89[CHB][hapmap];0.93[JPT][hapmap];0.80[ASN][1000 genomes]
rs543672	0.80[AFR][1000 genomes]
rs56085433	0.99[ASN][1000 genomes]
rs56397888	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6584009	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6584020	0.82[JPT][hapmap]
rs7076303	0.80[ASN][1000 genomes]
rs7085474	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7096248	0.84[JPT][hapmap]
rs73327043	0.80[ASN][1000 genomes]
rs73327044	0.80[ASN][1000 genomes]
rs7895441	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7895976	0.88[CHB][hapmap];0.93[JPT][hapmap];0.80[ASN][1000 genomes]
rs7897091	0.89[CHB][hapmap];0.93[JPT][hapmap]
rs7899286	0.94[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7906450	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs7908923	0.84[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526180	chr10:97332195-97511037	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97335200-97373400	Weak transcription	Psoas Muscle	Psoas
2	chr10:97339600-97351400	Weak transcription	Placenta	Placenta

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