Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10501553	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10792711	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11233890	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1384749	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1483384	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1545863	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1545864	0.92[AMR][1000 genomes]
rs1601091	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1945805	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1945811	0.82[EUR][1000 genomes]
rs1945813	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1945814	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2374466	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2449595	0.81[ASN][1000 genomes]
rs2449596	0.82[ASN][1000 genomes]
rs2449599	0.81[ASN][1000 genomes]
rs2514145	0.81[ASN][1000 genomes]
rs2514147	0.82[ASN][1000 genomes]
rs2514148	0.82[ASN][1000 genomes]
rs2514172	0.81[ASN][1000 genomes]
rs34555244	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4944460	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7107725	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs963146	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898025	chr11:83658909-83796678	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv1039924	chr11:83662904-83993497	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv541102	chr11:83662904-83993497	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv898026	chr11:83685801-83789540	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv1814410	chr11:83696133-83775326	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83691600-83701200	Weak transcription	Brain Hippocampus Middle	brain

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