Variant report

Variant	rs7937701
Chromosome Location	chr11:72832677-72832678
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10437750	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10793054	0.87[CHB][hapmap];0.96[YRI][hapmap]
rs10793055	0.87[CHB][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs10793056	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10898894	0.92[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes]
rs10898895	0.96[YRI][hapmap]
rs10898896	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10898900	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11235651	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12288580	0.92[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs12294533	0.96[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs1982585	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2187494	0.82[YRI][hapmap]
rs2276379	0.96[CEU][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs4394861	0.86[YRI][hapmap]
rs55671951	0.82[AFR][1000 genomes]
rs60355221	0.81[AFR][1000 genomes]
rs6592500	0.81[YRI][hapmap]
rs6592508	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7104158	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7129921	0.87[CHB][hapmap]
rs7925928	0.91[CHB][hapmap];0.95[YRI][hapmap]
rs7936751	0.86[CHB][hapmap];0.95[YRI][hapmap]
rs9645708	1.00[YRI][hapmap];0.87[AFR][1000 genomes]

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72793600-72850600	Weak transcription	NH-A	brain
2	chr11:72795600-72836000	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr11:72806800-72851000	Weak transcription	Rectal Smooth Muscle	rectum
4	chr11:72807000-72847800	Weak transcription	Small Intestine	intestine
5	chr11:72807200-72833400	Weak transcription	Brain Substantia Nigra	brain
6	chr11:72807600-72836400	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr11:72807800-72836000	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:72810800-72837800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr11:72811000-72851600	Weak transcription	Pancreas	Pancrea
10	chr11:72818600-72836000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
11	chr11:72821200-72835800	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr11:72821400-72834400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr11:72822400-72850200	Weak transcription	A549	lung
14	chr11:72823200-72848000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr11:72823600-72850200	Weak transcription	NHLF	lung
16	chr11:72824000-72838000	Weak transcription	Brain Cingulate Gyrus	brain
17	chr11:72824600-72835800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr11:72825400-72835800	Weak transcription	Fetal Kidney	kidney
19	chr11:72825400-72851400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr11:72825600-72835800	Weak transcription	Primary T cells from cord blood	blood
21	chr11:72825600-72851600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr11:72826000-72851600	Weak transcription	Gastric	stomach
23	chr11:72826200-72835200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr11:72826200-72835800	Weak transcription	Adipose Nuclei	Adipose
25	chr11:72826200-72845200	Weak transcription	Thymus	Thymus
26	chr11:72826200-72850800	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr11:72826200-72851200	Weak transcription	Hela-S3	cervix
28	chr11:72826400-72834400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr11:72826400-72835800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
30	chr11:72826400-72836000	Weak transcription	Fetal Lung	lung
31	chr11:72826400-72836200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr11:72826400-72837800	Weak transcription	Ovary	ovary
33	chr11:72826400-72838400	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr11:72826400-72839200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
35	chr11:72826400-72840200	Weak transcription	Lung	lung
36	chr11:72826400-72843000	Weak transcription	Aorta	Aorta
37	chr11:72826400-72845200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr11:72826400-72845200	Weak transcription	Spleen	Spleen
39	chr11:72826400-72848800	Weak transcription	HSMMtube	muscle
40	chr11:72826400-72850600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr11:72826400-72850800	Weak transcription	Fetal Brain Male	brain
42	chr11:72826400-72851600	Weak transcription	Placenta Amnion	Placenta Amnion
43	chr11:72826600-72832800	Weak transcription	Primary T helper cells PMA-I stimulated	--
44	chr11:72826600-72834800	Weak transcription	Fetal Muscle Trunk	muscle
45	chr11:72826600-72836000	Weak transcription	Right Ventricle	heart
46	chr11:72826600-72836000	Weak transcription	Stomach Smooth Muscle	stomach
47	chr11:72826600-72836200	Weak transcription	Fetal Brain Female	brain
48	chr11:72826600-72836400	Weak transcription	Fetal Stomach	stomach
49	chr11:72826800-72833200	Weak transcription	HUVEC	blood vessel
50	chr11:72826800-72835800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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