Variant report

Variant	rs8033985
Chromosome Location	chr15:60621811-60621812
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10851677	0.95[ASN][1000 genomes]
rs11071516	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12900365	0.83[ASN][1000 genomes]
rs28437402	0.95[ASN][1000 genomes]
rs28508289	0.92[ASN][1000 genomes]
rs28642929	0.98[ASN][1000 genomes]
rs28771688	0.96[ASN][1000 genomes]
rs28870083	0.95[ASN][1000 genomes]
rs2899656	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4775260	0.94[ASN][1000 genomes]
rs4775261	0.94[ASN][1000 genomes]
rs7163836	0.85[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.81[JPT][hapmap];0.91[ASN][1000 genomes]
rs7165285	0.94[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs8033985	C2CD4A	cis	cerebellum	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60621000-60622200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr15:60621600-60627600	Weak transcription	NHDF-Ad	bronchial
3	chr15:60621800-60623200	Weak transcription	HSMM	muscle
4	chr15:60621800-60627600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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