The 2.0 version of rSNPBase

Variant report

Variant rs8034420
Chromosome Location chr15:45772608-45772609
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45750800-45781000 Weak transcription Stomach Mucosa stomach
2 chr15:45751200-45801600 Weak transcription Rectal Smooth Muscle rectum
3 chr15:45754200-45801600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr15:45757000-45794600 Weak transcription Colonic Mucosa Colon
5 chr15:45757000-45801800 Weak transcription Gastric stomach
6 chr15:45760800-45772800 Weak transcription HSMMtube muscle
7 chr15:45762000-45773800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr15:45763400-45777200 Weak transcription Primary B cells from peripheral blood blood
9 chr15:45767200-45813600 Weak transcription Psoas Muscle Psoas
10 chr15:45767400-45781000 Weak transcription Lung lung
11 chr15:45767600-45775600 Weak transcription Duodenum Mucosa Duodenum
12 chr15:45767600-45775600 Weak transcription Esophagus oesophagus
13 chr15:45768200-45780200 Weak transcription Fetal Stomach stomach
14 chr15:45768600-45773000 Strong transcription Rectal Mucosa Donor 31 rectum
15 chr15:45768800-45776000 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr15:45769200-45781400 Weak transcription Osteobl bone
17 chr15:45769200-45812000 Weak transcription Small Intestine intestine
18 chr15:45769400-45775600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr15:45769400-45778000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr15:45769400-45791800 Weak transcription NH-A brain
21 chr15:45769400-45794600 Weak transcription Fetal Intestine Small intestine
22 chr15:45769400-45794800 Weak transcription Ovary ovary
23 chr15:45769400-45813000 Weak transcription Fetal Intestine Large intestine
24 chr15:45769600-45779200 Weak transcription Liver Liver
25 chr15:45769600-45780000 Weak transcription Left Ventricle heart
26 chr15:45769800-45778400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr15:45769800-45794600 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr15:45770200-45780000 Weak transcription Fetal Muscle Trunk muscle
29 chr15:45770200-45781000 Weak transcription Stomach Smooth Muscle stomach
30 chr15:45770800-45779600 Weak transcription Colon Smooth Muscle Colon
31 chr15:45771000-45775600 Weak transcription Primary T cells from cord blood blood
32 chr15:45771000-45778000 Weak transcription Aorta Aorta
33 chr15:45771000-45813400 Weak transcription Right Ventricle heart
34 chr15:45771200-45777200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr15:45771200-45814000 Weak transcription Placenta Placenta
36 chr15:45771400-45780200 Weak transcription Fetal Muscle Leg muscle
37 chr15:45771600-45777000 Weak transcription Brain Hippocampus Middle brain
38 chr15:45771800-45778400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr15:45772000-45779400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr15:45772000-45801600 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr15:45772200-45779200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr15:45772200-45791000 Weak transcription HSMM muscle
43 chr15:45772600-45773200 Strong transcription Primary B cells from cord blood blood
44 chr15:45772600-45773800 Strong transcription Brain Anterior Caudate brain
45 chr15:45772600-45774000 Strong transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015