Variant report

Variant	rs8037835
Chromosome Location	chr15:78021538-78021539
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:78021486..78023162-chr15:78023634..78026490,2	K562	blood:
2	chr15:78021356..78025369-chr15:78027266..78032240,6	K562	blood:

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs11853548	1.00[EUR][1000 genomes]
rs11853824	1.00[EUR][1000 genomes]
rs11854532	1.00[EUR][1000 genomes]
rs11855576	1.00[EUR][1000 genomes]
rs11857529	1.00[EUR][1000 genomes]
rs12324340	1.00[EUR][1000 genomes]
rs2667765	1.00[EUR][1000 genomes]
rs28439897	1.00[EUR][1000 genomes]
rs28498563	1.00[EUR][1000 genomes]
rs28498879	1.00[EUR][1000 genomes]
rs28557414	1.00[EUR][1000 genomes]
rs28634734	1.00[EUR][1000 genomes]
rs28635388	1.00[EUR][1000 genomes]
rs34611551	1.00[EUR][1000 genomes]
rs4077809	1.00[AMR][1000 genomes]
rs4563012	1.00[AMR][1000 genomes]
rs55948223	1.00[AMR][1000 genomes]
rs57215429	1.00[EUR][1000 genomes]
rs57365401	1.00[EUR][1000 genomes]
rs57738968	1.00[EUR][1000 genomes]
rs58372659	1.00[EUR][1000 genomes]
rs58432220	1.00[EUR][1000 genomes]
rs58490956	1.00[EUR][1000 genomes]
rs58723442	1.00[EUR][1000 genomes]
rs58745170	1.00[EUR][1000 genomes]
rs59320137	1.00[EUR][1000 genomes]
rs60322323	1.00[EUR][1000 genomes]
rs60380768	1.00[EUR][1000 genomes]
rs60772286	1.00[EUR][1000 genomes]
rs6495243	1.00[EUR][1000 genomes]
rs7181139	1.00[EUR][1000 genomes]
rs7182984	1.00[EUR][1000 genomes]
rs73448973	1.00[EUR][1000 genomes]
rs73450724	1.00[EUR][1000 genomes]
rs73450959	1.00[EUR][1000 genomes]
rs74025393	1.00[EUR][1000 genomes]
rs74026822	1.00[AMR][1000 genomes]
rs74026824	1.00[AMR][1000 genomes]
rs74026893	1.00[AMR][1000 genomes]
rs74026895	1.00[AMR][1000 genomes]
rs74026896	1.00[AMR][1000 genomes]
rs74029404	1.00[AMR][1000 genomes]
rs74029437	1.00[AMR][1000 genomes]
rs74029441	1.00[AMR][1000 genomes]
rs8038325	1.00[EUR][1000 genomes]
rs907375	1.00[EUR][1000 genomes]
rs907394	1.00[EUR][1000 genomes]
rs907397	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040852	chr15:77160237-78137541	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	nsv916323	chr15:77485765-78121259	Enhancers Strong transcription Weak transcription Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	nsv833060	chr15:77816654-78035204	Weak transcription Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
4	esv1806097	chr15:77817889-78301377	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
5	nsv529491	chr15:77932659-78751516	Genic enhancers Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
6	nsv833061	chr15:77998374-78121905	Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	nsv570150	chr15:78004743-78038124	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	nsv570159	chr15:78008843-78022087	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:78013000-78031200	Weak transcription	Fetal Brain Female	brain
2	chr15:78014000-78031000	Weak transcription	Spleen	Spleen
3	chr15:78017200-78024400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr15:78017200-78024800	Weak transcription	Brain Angular Gyrus	brain
5	chr15:78020400-78022000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr15:78020400-78022000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
7	chr15:78020400-78022000	Bivalent Enhancer	Fetal Muscle Leg	muscle
8	chr15:78020800-78030200	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr15:78021000-78021600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr15:78021400-78021800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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