Variant report

Variant rs805379
Chromosome Location chr2:54092984-54092985
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54074800-54096600 Weak transcription Hela-S3 cervix
2 chr2:54081800-54094400 Weak transcription Small Intestine intestine
3 chr2:54082800-54093800 Weak transcription Spleen Spleen
4 chr2:54084000-54102000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr2:54084200-54093200 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr2:54085400-54106600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr2:54086600-54101200 Weak transcription Fetal Brain Male brain
8 chr2:54087000-54168000 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr2:54087200-54176000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
10 chr2:54087400-54093800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:54087400-54097400 Strong transcription Primary B cells from cord blood blood
12 chr2:54087400-54112200 Weak transcription Psoas Muscle Psoas
13 chr2:54087400-54112600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr2:54087400-54117400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:54087400-54137600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr2:54087600-54093000 Weak transcription H9 Cell Line embryonic stem cell
17 chr2:54087600-54093800 Weak transcription Esophagus oesophagus
18 chr2:54087600-54093800 Weak transcription Fetal Intestine Small intestine
19 chr2:54087600-54100800 Weak transcription Brain Angular Gyrus brain
20 chr2:54087600-54110800 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr2:54087600-54113600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr2:54087600-54116600 Weak transcription Pancreas Pancrea
23 chr2:54087600-54117000 Weak transcription Placenta Amnion Placenta Amnion
24 chr2:54087600-54187600 Weak transcription Stomach Mucosa stomach
25 chr2:54087800-54112200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr2:54088000-54113800 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr2:54088200-54100800 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr2:54088400-54137200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr2:54088600-54138000 Strong transcription Primary B cells from peripheral blood blood
30 chr2:54089200-54104400 Strong transcription Osteobl bone
31 chr2:54089400-54095400 Strong transcription Fetal Muscle Trunk muscle
32 chr2:54089800-54096800 Strong transcription Fetal Muscle Leg muscle
33 chr2:54089800-54106200 Strong transcription Left Ventricle heart
34 chr2:54089800-54136000 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr2:54090000-54093200 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr2:54090000-54098800 Strong transcription Primary monocytes fromperipheralblood blood
37 chr2:54090200-54095400 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr2:54090200-54096600 Strong transcription Fetal Intestine Large intestine
39 chr2:54090200-54097000 Strong transcription HepG2 liver
40 chr2:54090200-54097600 Strong transcription HSMM muscle
41 chr2:54090200-54103600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr2:54090200-54107400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr2:54090200-54137800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr2:54090200-54138200 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr2:54090400-54093200 Strong transcription Right Ventricle heart
46 chr2:54090400-54094000 Strong transcription Fetal Kidney kidney
47 chr2:54090400-54094600 Strong transcription Lung lung
48 chr2:54090400-54095000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
49 chr2:54090400-54096800 Strong transcription Stomach Smooth Muscle stomach
50 chr2:54090400-54097000 Strong transcription Primary T regulatory cells fromperipheralblood blood

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