Variant report

Variant	rs867803
Chromosome Location	chr11:36618883-36618884
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:36611242..36613521-chr11:36616651..36619477,2	K562	blood:

Extended variants
information (count: 184 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:180)

rs_ID	r²[population]
rs10501158	1.00[CEU][hapmap];0.89[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10501159	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10501160	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10501161	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10836580	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10836581	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs11033708	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs11033712	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs11033717	0.84[EUR][1000 genomes]
rs11033723	0.86[AFR][1000 genomes]
rs11033725	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs11033727	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs11033731	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11033732	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11033733	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11033734	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11033735	0.84[EUR][1000 genomes]
rs11822918	0.81[EUR][1000 genomes]
rs12271660	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12277101	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12277310	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12277468	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12279449	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12279924	0.84[EUR][1000 genomes]
rs12292391	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12292943	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12293987	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12295400	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12416842	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12417057	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12417264	1.00[CEU][hapmap];0.91[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12417768	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12417778	1.00[CEU][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12417783	1.00[CEU][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12418480	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12419483	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12419750	1.00[CEU][hapmap];0.89[YRI][hapmap];0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12420509	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12420930	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12420954	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12421044	1.00[EUR][1000 genomes]
rs12421512	1.00[CEU][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12421514	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12421531	1.00[CEU][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12421641	1.00[CEU][hapmap]
rs12422069	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1391542	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1391543	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1399600	1.00[CEU][hapmap]
rs1498339	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1498340	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1498341	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1498342	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1498343	0.84[EUR][1000 genomes]
rs1498344	0.84[EUR][1000 genomes]
rs1515057	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1566244	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16926237	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16929067	1.00[CEU][hapmap]
rs16929071	1.00[CEU][hapmap]
rs16929073	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs16929076	1.00[CEU][hapmap]
rs16929119	1.00[CEU][hapmap];0.91[YRI][hapmap];0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929126	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16929136	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs16929138	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16929141	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16929145	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929147	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929149	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929170	1.00[CEU][hapmap];0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929178	1.00[CEU][hapmap];0.99[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs16929182	1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs16929194	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929197	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929201	1.00[CEU][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929204	1.00[CEU][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929208	0.84[EUR][1000 genomes]
rs16929216	1.00[CEU][hapmap];0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929222	1.00[CEU][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16929227	1.00[CEU][hapmap];0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929247	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs16929249	1.00[CEU][hapmap];0.91[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16929268	1.00[CEU][hapmap];0.89[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1980131	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2056094	1.00[CEU][hapmap];0.90[AMR][1000 genomes]
rs2422296	0.84[EUR][1000 genomes]
rs2422297	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs2901704	1.00[CEU][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34435837	0.84[EUR][1000 genomes]
rs35329885	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3740957	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs4151000	0.90[AMR][1000 genomes]
rs4151040	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4151045	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs57856061	0.88[EUR][1000 genomes]
rs58084113	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs58344758	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58652755	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58889177	1.00[EUR][1000 genomes]
rs59179248	0.88[EUR][1000 genomes]
rs60281434	0.88[EUR][1000 genomes]
rs61272071	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61432856	0.84[EUR][1000 genomes]
rs61686617	0.84[EUR][1000 genomes]
rs7102491	0.85[EUR][1000 genomes]
rs7102864	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7103064	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs7112274	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7113687	0.98[EUR][1000 genomes]
rs7115697	0.98[EUR][1000 genomes]
rs7124815	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs7125002	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs7128419	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs7130097	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7130536	0.84[EUR][1000 genomes]
rs7130556	0.98[EUR][1000 genomes]
rs7131496	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs72640809	0.91[EUR][1000 genomes]
rs72640869	0.83[EUR][1000 genomes]
rs72640870	0.88[EUR][1000 genomes]
rs72640871	0.88[EUR][1000 genomes]
rs72640872	0.88[EUR][1000 genomes]
rs73437905	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73437908	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73437936	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73437939	0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73437947	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73437955	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73437958	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73437965	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73437967	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73437973	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73437975	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73437989	0.84[EUR][1000 genomes]
rs73438001	0.84[EUR][1000 genomes]
rs73439913	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs73439916	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439922	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439925	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439930	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439932	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439933	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439937	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439954	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439965	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73439971	1.00[EUR][1000 genomes]
rs73439975	1.00[EUR][1000 genomes]
rs73439987	0.98[EUR][1000 genomes]
rs73439990	0.98[EUR][1000 genomes]
rs73453401	0.93[AMR][1000 genomes]
rs73455516	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73455518	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73455531	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73455534	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73455539	0.84[EUR][1000 genomes]
rs73455545	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73455548	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73455552	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73455553	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7480202	1.00[CEU][hapmap]
rs7926684	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7927358	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7929473	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs7929652	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7937683	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs7944879	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7946993	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs867801	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs867804	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs868613	1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs869206	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs869207	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs871912	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs872053	1.00[CEU][hapmap];0.90[AMR][1000 genomes]
rs885374	1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs955772	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs969611	1.00[CEU][hapmap];0.99[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9971465	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9971578	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv832123	chr11:36582872-36757443	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
4	esv1850719	chr11:36616867-36657272	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36614200-36619600	Transcr. at gene 5' and 3'	Dnd41	blood
2	chr11:36616600-36621800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr11:36616600-36640400	Weak transcription	Esophagus	oesophagus
4	chr11:36616600-36657000	Weak transcription	Left Ventricle	heart
5	chr11:36616800-36621800	Active TSS	Fetal Thymus	thymus
6	chr11:36616800-36639600	Weak transcription	Aorta	Aorta
7	chr11:36617000-36622200	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr11:36617200-36621800	Active TSS	Thymus	Thymus
9	chr11:36617200-36622000	Weak transcription	Primary hematopoietic stem cells	blood
10	chr11:36617200-36626800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr11:36617200-36630000	Weak transcription	HSMMtube	muscle
12	chr11:36617200-36640000	Weak transcription	Fetal Stomach	stomach
13	chr11:36617400-36632400	Weak transcription	Stomach Smooth Muscle	stomach
14	chr11:36617600-36622000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr11:36618000-36623400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr11:36618000-36640400	Weak transcription	Primary T cells from cord blood	blood
17	chr11:36618200-36620200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
18	chr11:36618400-36622000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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