Variant report

Variant	rs3740957
Chromosome Location	chr11:36616112-36616113
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr11:36615821-36616356	Hela-S3	cervix:	n/a	chr11:36616306-36616317
2	MAX	chr11:36615871-36616289	K562	blood:	n/a	n/a
3	RFX5	chr11:36615689-36616116	K562	blood:	n/a	n/a
4	ELF1	chr11:36615755-36616533	MCF-7	breast:	n/a	chr11:36616238-36616250
5	POLR2A	chr11:36615797-36616386	PFSK-1	brain:	n/a	n/a
6	POLR2A	chr11:36615659-36616658	H1-hESC	embryonic stem cell:	n/a	n/a
7	MYC	chr11:36615747-36616513	K562	blood:	n/a	chr11:36616306-36616317
8	MAX	chr11:36615734-36616297	MCF-7	breast:	n/a	n/a
9	TAF1	chr11:36615798-36616512	H1-neurons	neurons:	n/a	n/a
10	SIX5	chr11:36615750-36616149	K562	blood:	n/a	chr11:36615979-36615988 chr11:36616027-36616041 chr11:36615981-36615990
11	USF2	chr11:36615802-36616445	Hela-S3	cervix:	n/a	chr11:36616236-36616252
12	NFIC	chr11:36615714-36616206	HepG2	liver:	n/a	n/a
13	POLR2A	chr11:36615764-36616639	H1-neurons	neurons:	n/a	n/a
14	MAFK	chr11:36615829-36616119	Hela-S3	cervix:	n/a	n/a
15	POLR2A	chr11:36615868-36616321	HUVEC	blood vessel:	n/a	n/a
16	BCL3	chr11:36615757-36616238	A549	lung:	n/a	n/a
17	ELF1	chr11:36615692-36616350	HCT-116	colon:	n/a	chr11:36616238-36616250
18	POLR2A	chr11:36615944-36616471	Hela-S3	cervix:	n/a	n/a
19	POLR2A	chr11:36615763-36616207	PANC-1	pancreas:	n/a	n/a
20	TCF12	chr11:36615575-36616378	ECC-1	luminal epithelium:	n/a	n/a
21	ZNF143	chr11:36615738-36616254	GM12878	blood:	n/a	chr11:36615972-36615990 chr11:36615981-36615990 chr11:36615979-36615988 chr11:36616238-36616248
22	CUX1	chr11:36615755-36616355	K562	blood:	n/a	n/a
23	POLR2A	chr11:36615941-36616500	A549	lung:	n/a	n/a
24	ETS1	chr11:36615638-36616312	A549	lung:	n/a	chr11:36616027-36616040 chr11:36615978-36615991 chr11:36615979-36615992 chr11:36616057-36616070
25	ZNF143	chr11:36615701-36616546	K562	blood:	n/a	chr11:36615972-36615990 chr11:36615981-36615990 chr11:36615979-36615988 chr11:36616238-36616248
26	MAFK	chr11:36615712-36616656	K562	blood:	n/a	n/a
27	MYBL2	chr11:36615723-36616472	HepG2	liver:	n/a	n/a
28	RCOR1	chr11:36615756-36616514	K562	blood:	n/a	n/a
29	TAF1	chr11:36615828-36616341	H1-hESC	embryonic stem cell:	n/a	n/a
30	TAF1	chr11:36615815-36616130	SK-N-SH	brain:	n/a	n/a
31	POLR2A	chr11:36615859-36616578	Hela-S3	cervix:	n/a	n/a
32	ELF1	chr11:36615749-36616396	MCF-7	breast:	n/a	chr11:36616238-36616250
33	STAT5A	chr11:36615681-36616233	K562	blood:	n/a	chr11:36616091-36616114 chr11:36615972-36615986 chr11:36615975-36615983 chr11:36615969-36615989
34	MAX	chr11:36615762-36616443	ECC-1	luminal epithelium:	n/a	chr11:36616306-36616317
35	ATF2	chr11:36615870-36616235	H1-hESC	embryonic stem cell:	n/a	n/a
36	POLR2A	chr11:36615885-36616256	HUVEC	blood vessel:	n/a	n/a
37	POLR2A	chr11:36615891-36616284	HepG2	liver:	n/a	n/a
38	POLR2A	chr11:36615946-36616253	A549	lung:	n/a	n/a
39	MAX	chr11:36615801-36616340	K562	blood:	n/a	chr11:36616306-36616317
40	GABPA	chr11:36615802-36616403	H1-hESC	embryonic stem cell:	n/a	n/a
41	MXI1	chr11:36615833-36616158	K562	blood:	n/a	n/a
42	ELF1	chr11:36615825-36616201	HepG2	liver:	n/a	n/a
43	CEBPB	chr11:36615841-36616478	Hela-S3	cervix:	n/a	n/a
44	SIX5	chr11:36615459-36616605	A549	lung:	n/a	chr11:36616439-36616448 chr11:36615979-36615988 chr11:36616027-36616041 chr11:36615981-36615990
45	SRF	chr11:36615770-36616358	MCF-7	breast:	n/a	n/a
46	CEBPB	chr11:36615865-36616178	K562	blood:	n/a	n/a
47	YY1	chr11:36615761-36616260	SK-N-SH_RA	brain:	n/a	n/a
48	CTCF	chr11:36616100-36616250	HBMEC	blood vessel:	n/a	n/a
49	MBD4	chr11:36615672-36616204	HepG2	liver:	n/a	n/a
50	GABPA	chr11:36615621-36616427	A549	lung:	n/a	n/a

Variant related genes	Relation type
C11orf74	TF binding region

Extended variants
information (count: 181 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:178)

rs_ID	r²[population]
rs10501158	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs10501159	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10501160	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10501161	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10836580	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10836581	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11033708	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11033712	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11033717	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11033723	0.82[ASN][1000 genomes]
rs11033725	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11033727	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11033731	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs11033732	0.84[EUR][1000 genomes]
rs11033733	0.84[EUR][1000 genomes]
rs11033734	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs11033735	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11822918	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12271660	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12277101	0.84[EUR][1000 genomes]
rs12277310	0.84[EUR][1000 genomes]
rs12277468	0.84[EUR][1000 genomes]
rs12279449	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12279924	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12286114	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12292391	0.81[EUR][1000 genomes]
rs12292943	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12293987	1.00[CEU][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12295400	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12416842	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12417057	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12417264	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs12417768	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12417778	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12417783	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12418480	0.85[EUR][1000 genomes]
rs12419483	0.85[EUR][1000 genomes]
rs12419750	1.00[CEU][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12420509	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12420930	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12420954	1.00[CEU][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12421044	0.85[EUR][1000 genomes]
rs12421512	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12421514	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs12421531	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs12421641	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12422069	0.85[EUR][1000 genomes]
rs1391542	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1391543	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1399600	1.00[CEU][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1498339	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs1498340	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs1498341	0.82[EUR][1000 genomes]
rs1498342	0.84[EUR][1000 genomes]
rs1498343	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1498344	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1515057	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1566244	0.85[EUR][1000 genomes]
rs16926237	0.85[EUR][1000 genomes]
rs16929067	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16929071	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16929076	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16929119	1.00[CEU][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16929126	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs16929136	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929138	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs16929141	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs16929145	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929147	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16929149	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929170	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929178	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929182	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929194	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929197	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929201	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929204	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929208	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929216	1.00[CEU][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16929222	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs16929227	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929247	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929249	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16929265	1.00[JPT][hapmap]
rs16929268	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs1980131	1.00[CEU][hapmap]
rs2056094	1.00[CEU][hapmap]
rs2422296	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2422297	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2901704	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs34435837	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35329885	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4151000	0.82[CEU][hapmap]
rs4151013	0.81[ASN][1000 genomes]
rs4151040	1.00[CEU][hapmap]
rs4151045	1.00[CEU][hapmap]
rs4151051	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56132068	0.87[EUR][1000 genomes]
rs58084113	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs58344758	0.85[EUR][1000 genomes]
rs58652755	0.85[EUR][1000 genomes]
rs58889177	0.85[EUR][1000 genomes]
rs61272071	0.86[EUR][1000 genomes]
rs61432856	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61686617	0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7102491	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7102864	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7103064	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7107464	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs7110520	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7112274	0.85[EUR][1000 genomes]
rs7113687	0.84[EUR][1000 genomes]
rs7115697	0.84[EUR][1000 genomes]
rs7124815	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7125002	1.00[CEU][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7128419	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7130097	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs7130536	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7130556	0.84[EUR][1000 genomes]
rs7131496	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73437905	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73437908	0.82[EUR][1000 genomes]
rs73437936	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73437939	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73437947	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73437955	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73437958	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73437965	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73437967	0.85[EUR][1000 genomes]
rs73437973	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73437975	0.85[EUR][1000 genomes]
rs73437989	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73438001	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73439913	0.81[EUR][1000 genomes]
rs73439916	0.85[EUR][1000 genomes]
rs73439922	0.85[EUR][1000 genomes]
rs73439925	0.85[EUR][1000 genomes]
rs73439930	0.85[EUR][1000 genomes]
rs73439932	0.85[EUR][1000 genomes]
rs73439933	0.85[EUR][1000 genomes]
rs73439937	0.85[EUR][1000 genomes]
rs73439954	0.85[EUR][1000 genomes]
rs73439965	0.85[EUR][1000 genomes]
rs73439971	0.85[EUR][1000 genomes]
rs73439975	0.85[EUR][1000 genomes]
rs73439987	0.84[EUR][1000 genomes]
rs73439990	0.84[EUR][1000 genomes]
rs73455517	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73455527	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73455534	0.82[EUR][1000 genomes]
rs73455539	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73455545	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73455548	0.85[EUR][1000 genomes]
rs73455552	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73455553	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7480202	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7926684	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7927358	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7929473	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7929652	0.85[EUR][1000 genomes]
rs7937683	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7938326	0.82[CEU][hapmap]
rs7939136	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7944879	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7946993	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs867801	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs867803	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs867804	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs868613	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs869206	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs869207	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs871912	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs872053	1.00[CEU][hapmap]
rs885374	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs955772	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs969611	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9971465	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs9971578	1.00[CEU][hapmap];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv832123	chr11:36582872-36757443	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36611400-36616800	Transcr. at gene 5' and 3'	Fetal Thymus	thymus
2	chr11:36614200-36617200	Transcr. at gene 5' and 3'	Thymus	Thymus
3	chr11:36614200-36619600	Transcr. at gene 5' and 3'	Dnd41	blood
4	chr11:36615400-36616200	Active TSS	Skeletal Muscle Female	skeletal muscle
5	chr11:36615400-36616400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr11:36615600-36616200	Active TSS	Monocytes-CD14+_RO01746	blood
7	chr11:36615600-36616600	Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr11:36615600-36616600	Bivalent/Poised TSS	Primary B cells from cord blood	blood
9	chr11:36615600-36616800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr11:36615600-36616800	Active TSS	Brain Angular Gyrus	brain
11	chr11:36615600-36616800	Active TSS	Fetal Lung	lung
12	chr11:36615600-36617000	Active TSS	K562	blood
13	chr11:36615800-36616200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
14	chr11:36615800-36616200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr11:36615800-36616200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr11:36615800-36616400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr11:36615800-36616400	Bivalent/Poised TSS	Primary T killer naive cells fromperipheralblood	blood
18	chr11:36615800-36616400	Active TSS	Adipose Nuclei	Adipose
19	chr11:36615800-36616400	Active TSS	Liver	Liver
20	chr11:36615800-36616400	Active TSS	Fetal Brain Female	brain
21	chr11:36615800-36616400	Active TSS	HUVEC	blood vessel
22	chr11:36615800-36616600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr11:36615800-36616600	Active TSS	iPS-18 Cell Line	embryonic stem cell
24	chr11:36615800-36616600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr11:36615800-36616600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr11:36615800-36616600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
27	chr11:36615800-36616600	Active TSS	Primary T cells from cord blood	blood
28	chr11:36615800-36616600	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
29	chr11:36615800-36616600	Active TSS	Primary T helper naive cells from peripheral blood	blood
30	chr11:36615800-36616600	Flanking Bivalent TSS/Enh	Primary Natural Killer cells fromperipheralblood	blood
31	chr11:36615800-36616600	Active TSS	Brain Anterior Caudate	brain
32	chr11:36615800-36616600	Active TSS	Brain Cingulate Gyrus	brain
33	chr11:36615800-36616600	Active TSS	Brain Hippocampus Middle	brain
34	chr11:36615800-36616600	Active TSS	Brain Inferior Temporal Lobe	brain
35	chr11:36615800-36616600	Active TSS	Pancreatic Islets	Pancreatic Islet
36	chr11:36615800-36616600	Active TSS	Skeletal Muscle Male	skeletal muscle
37	chr11:36615800-36616600	Active TSS	Stomach Smooth Muscle	stomach
38	chr11:36615800-36616600	Active TSS	Osteobl	bone
39	chr11:36615800-36616800	Active TSS	ES-I3 Cell Line	embryonic stem cell
40	chr11:36615800-36616800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr11:36615800-36616800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr11:36615800-36616800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr11:36615800-36616800	Bivalent/Poised TSS	Primary T helper naive cells fromperipheralblood	blood
44	chr11:36615800-36616800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr11:36615800-36616800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr11:36615800-36616800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
47	chr11:36615800-36616800	Active TSS	Brain Substantia Nigra	brain
48	chr11:36615800-36616800	Active TSS	Duodenum Smooth Muscle	Duodenum
49	chr11:36615800-36616800	Active TSS	Fetal Adrenal Gland	Adrenal Gland
50	chr11:36615800-36616800	Active TSS	Fetal Muscle Trunk	muscle

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