Variant report

Variant	rs916601
Chromosome Location	chr7:126970754-126970755
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:126963386..126966341-chr7:126969354..126971418,2	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10251884	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10272297	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs1029358	1.00[CEU][hapmap];0.89[AMR][1000 genomes]
rs1029359	1.00[CEU][hapmap];0.89[AMR][1000 genomes]
rs1029360	1.00[CEU][hapmap];0.89[AMR][1000 genomes]
rs11563648	0.86[AFR][1000 genomes]
rs12706779	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1361937	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1361938	0.95[YRI][hapmap]
rs1361939	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1361941	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs1361944	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1419395	1.00[YRI][hapmap]
rs1419396	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1419397	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1419412	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1419413	1.00[CEU][hapmap];0.89[AMR][1000 genomes]
rs1419415	1.00[CEU][hapmap];0.89[AMR][1000 genomes]
rs1419422	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1557640	1.00[CEU][hapmap];0.89[AMR][1000 genomes]
rs1946106	0.89[AMR][1000 genomes]
rs2027954	1.00[YRI][hapmap]
rs2040500	1.00[YRI][hapmap]
rs2188182	1.00[CEU][hapmap];0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2402858	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3944151	0.86[AFR][1000 genomes]
rs4548117	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4731350	1.00[YRI][hapmap]
rs4731351	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6467122	1.00[YRI][hapmap]
rs6957320	1.00[YRI][hapmap]
rs6959198	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6972420	1.00[YRI][hapmap]
rs7779672	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7805194	1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs7805256	1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs7810990	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs951808	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs986585	1.00[CEU][hapmap];0.89[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126969400-126971000	Enhancers	Rectal Mucosa Donor 31	rectum
2	chr7:126969600-126971000	Enhancers	Sigmoid Colon	Sigmoid Colon
3	chr7:126969800-126970800	Active TSS	Rectal Mucosa Donor 29	rectum

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