Variant report

Variant	rs7805194
Chromosome Location	chr7:126984560-126984561
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:126983343..126987079-chr7:126991252..126994803,3	K562	blood:
2	chr7:126983674..126985378-chr7:126988409..126990765,2	K562	blood:
3	chr7:126977128..126979944-chr7:126984146..126986183,2	K562	blood:
4	chr7:126982960..126985576-chr7:127008832..127010898,2	K562	blood:

Variant related genes	Relation type
ENSG00000224138	Chromatin interaction

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10487480	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs10954149	0.84[ASN][1000 genomes]
rs11563346	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs11563460	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11563467	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11563624	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11563628	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11563629	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11563630	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs11563634	1.00[CHB][hapmap];0.82[ASN][1000 genomes]
rs11563641	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11563648	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11563650	1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs11563652	0.97[ASN][1000 genomes]
rs12672573	0.84[ASN][1000 genomes]
rs12706779	0.85[AFR][1000 genomes]
rs12706780	1.00[ASN][1000 genomes]
rs12706783	0.84[ASN][1000 genomes]
rs12706784	0.84[ASN][1000 genomes]
rs12706785	0.84[ASN][1000 genomes]
rs13228039	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs13233168	1.00[ASN][1000 genomes]
rs13246300	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1361937	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs1361938	0.95[YRI][hapmap]
rs1361939	1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs1419395	1.00[YRI][hapmap]
rs1419396	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs1419398	0.84[ASN][1000 genomes]
rs1419399	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1419414	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17862368	0.84[ASN][1000 genomes]
rs17862369	0.84[ASN][1000 genomes]
rs17863291	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs17863295	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17863297	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17864195	0.97[ASN][1000 genomes]
rs17865345	0.90[ASN][1000 genomes]
rs17867824	0.97[ASN][1000 genomes]
rs17867840	1.00[CHB][hapmap];0.86[JPT][hapmap];0.84[ASN][1000 genomes]
rs17867842	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2027954	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2040500	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2188182	0.82[AFR][1000 genomes]
rs2269729	0.81[CHB][hapmap]
rs2402858	0.86[AFR][1000 genomes]
rs2402860	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs3944151	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4731350	0.95[CEU][hapmap];0.90[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4731351	0.85[AFR][1000 genomes]
rs6467122	1.00[YRI][hapmap]
rs6957320	1.00[YRI][hapmap]
rs6959198	1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs6972420	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71578227	0.97[ASN][1000 genomes]
rs7781891	1.00[ASN][1000 genomes]
rs7805256	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs916601	0.85[AFR][1000 genomes]
rs951808	1.00[YRI][hapmap];0.85[AFR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126982000-126987000	Weak transcription	HSMM	muscle
2	chr7:126984400-126987600	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr7:126984400-127000800	Weak transcription	HSMMtube	muscle

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