Variant report

Variant	rs11563650
Chromosome Location	chr7:126967032-126967033
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:126085913-126088095..7:126960843-126968648	GM12878	blood:

Variant related genes	Relation type
ENSG00000179603	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10487480	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10954149	0.82[ASN][1000 genomes]
rs11563346	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.85[TSI][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11563460	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.82[MKK][hapmap];0.85[TSI][hapmap];0.97[ASN][1000 genomes]
rs11563467	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11563624	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.85[TSI][hapmap];0.97[ASN][1000 genomes]
rs11563628	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs11563629	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs11563630	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];0.85[TSI][hapmap];0.82[ASN][1000 genomes]
rs11563634	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.88[TSI][hapmap];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11563641	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.91[TSI][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11563648	1.00[ASN][1000 genomes]
rs11563652	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12672573	1.00[CEU][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12706780	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12706783	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12706784	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12706785	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13228039	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs13233168	0.97[ASN][1000 genomes]
rs13246300	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1419398	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1419399	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1419414	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.82[MKK][hapmap];0.85[TSI][hapmap];0.97[ASN][1000 genomes]
rs17862368	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17862369	1.00[CEU][hapmap];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17863291	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17863295	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs17863297	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs17864195	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17865345	0.92[ASN][1000 genomes]
rs17867824	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17867840	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17867842	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2027954	1.00[CHB][hapmap]
rs2040500	1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs2269729	0.81[CHB][hapmap]
rs2402860	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[ASN][1000 genomes]
rs3944151	1.00[ASN][1000 genomes]
rs4731350	0.90[CHB][hapmap];0.81[CHD][hapmap];0.97[ASN][1000 genomes]
rs6972420	1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs71578227	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7781891	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7796747	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs7805194	1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs7805256	1.00[CHB][hapmap];0.97[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126967000-126967800	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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