Variant report

Variant	rs919378
Chromosome Location	chr14:81757218-81757219
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10138868	0.85[ASN][1000 genomes]
rs10142173	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10149489	0.85[ASN][1000 genomes]
rs10873336	0.85[ASN][1000 genomes]
rs11626709	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11626733	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12588160	0.85[ASN][1000 genomes]
rs12588234	0.85[ASN][1000 genomes]
rs1885604	0.90[CHB][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs1957542	0.90[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs1957543	0.85[ASN][1000 genomes]
rs1957544	0.90[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs1957545	0.85[ASN][1000 genomes]
rs1957548	0.84[ASN][1000 genomes]
rs2146244	0.83[CEU][hapmap];0.85[CHB][hapmap];0.83[CHD][hapmap];0.86[JPT][hapmap];0.88[TSI][hapmap];0.81[EUR][1000 genomes]
rs2371574	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28501387	0.85[ASN][1000 genomes]
rs28622938	0.85[ASN][1000 genomes]
rs3813535	0.86[CHB][hapmap];0.83[CHD][hapmap]
rs4903976	0.90[CHB][hapmap];0.83[CHD][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs4903977	0.85[ASN][1000 genomes]
rs4903979	0.85[ASN][1000 genomes]
rs4903980	0.85[ASN][1000 genomes]
rs55744181	0.85[ASN][1000 genomes]
rs6574635	0.86[CHB][hapmap]
rs6574636	0.85[CHB][hapmap];0.82[CHD][hapmap];0.81[JPT][hapmap]
rs6574638	0.90[CHB][hapmap];0.80[CHD][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs6574639	0.85[ASN][1000 genomes]
rs6574640	0.85[ASN][1000 genomes]
rs6574641	0.85[ASN][1000 genomes]
rs6574642	0.85[ASN][1000 genomes]
rs6574643	0.85[ASN][1000 genomes]
rs6574644	0.90[CHB][hapmap];0.83[CHD][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs6574645	0.85[ASN][1000 genomes]
rs7145964	0.90[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs7146488	0.90[CHB][hapmap];0.86[JPT][hapmap];0.84[ASN][1000 genomes]
rs7153097	0.85[ASN][1000 genomes]
rs7153538	0.85[ASN][1000 genomes]
rs7153613	0.85[ASN][1000 genomes]
rs7154309	0.90[CHB][hapmap];0.83[CHD][hapmap];0.86[JPT][hapmap];0.84[ASN][1000 genomes]
rs7155930	0.85[ASN][1000 genomes]
rs7156146	0.90[CHB][hapmap];0.83[CHD][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs7156251	0.85[ASN][1000 genomes]
rs7160788	0.85[ASN][1000 genomes]
rs8003051	0.90[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs8006006	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8010545	0.84[ASN][1000 genomes]
rs8021083	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81735600-81760200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr14:81741800-81768400	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr14:81742600-81763400	Weak transcription	Psoas Muscle	Psoas
4	chr14:81743800-81778400	Weak transcription	Fetal Kidney	kidney
5	chr14:81744400-81758600	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr14:81744400-81759200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr14:81745000-81769600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr14:81745200-81758600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr14:81749800-81762400	Weak transcription	HSMMtube	muscle
10	chr14:81749800-81771400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr14:81754400-81757400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr14:81754400-81777800	Weak transcription	Ovary	ovary
13	chr14:81755000-81769000	Weak transcription	Pancreas	Pancrea
14	chr14:81755400-81757600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr14:81756400-81760200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr14:81756600-81777400	Weak transcription	Fetal Muscle Leg	muscle
17	chr14:81756800-81757800	Strong transcription	K562	blood
18	chr14:81756800-81760200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr14:81757000-81757400	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr14:81757000-81757600	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr14:81757000-81758600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr14:81757000-81759000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr14:81757200-81758600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr14:81757200-81758600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr14:81757200-81760800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr14:81757200-81761800	Weak transcription	NHEK	skin
27	chr14:81757200-81762800	Weak transcription	HMEC	breast

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