Variant report

Variant rs9341534
Chromosome Location chr6:76470542-76470543
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:76459600-76472200 Weak transcription Small Intestine intestine
2 chr6:76460000-76475600 Weak transcription Psoas Muscle Psoas
3 chr6:76460000-76481400 Weak transcription Aorta Aorta
4 chr6:76460600-76476800 Weak transcription Lung lung
5 chr6:76461000-76480800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr6:76461000-76485000 Weak transcription Fetal Stomach stomach
7 chr6:76461400-76475000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr6:76461600-76475800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr6:76461600-76485000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:76462400-76482200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr6:76463400-76470600 Weak transcription Fetal Intestine Large intestine
12 chr6:76463400-76485200 Weak transcription Gastric stomach
13 chr6:76463600-76476000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr6:76463800-76473800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr6:76463800-76478400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:76464200-76478800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr6:76464200-76481600 Weak transcription HUVEC blood vessel
18 chr6:76464200-76485000 Weak transcription Pancreas Pancrea
19 chr6:76466200-76471400 Weak transcription Fetal Intestine Small intestine
20 chr6:76467400-76471600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr6:76467400-76471800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr6:76469000-76470800 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr6:76469000-76470800 Enhancers Brain Hippocampus Middle brain
24 chr6:76469000-76471000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr6:76469000-76471000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr6:76469000-76471000 Enhancers Brain Inferior Temporal Lobe brain
27 chr6:76469000-76471400 Enhancers Brain Anterior Caudate brain
28 chr6:76469000-76471400 Enhancers Brain Substantia Nigra brain
29 chr6:76469200-76471200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:76469400-76477800 Weak transcription GM12878-XiMat blood
31 chr6:76469400-76484800 Weak transcription Left Ventricle heart
32 chr6:76469400-76485200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:76470000-76470800 Enhancers HUES64 Cell Line embryonic stem cell
34 chr6:76470000-76471000 Enhancers HSMM muscle
35 chr6:76470000-76485000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr6:76470200-76470800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr6:76470200-76471200 Enhancers HSMMtube muscle
38 chr6:76470200-76471400 Enhancers Brain Angular Gyrus brain
39 chr6:76470200-76471600 Enhancers Brain Cingulate Gyrus brain
40 chr6:76470200-76472600 Enhancers Duodenum Mucosa Duodenum
41 chr6:76470200-76483200 Weak transcription Duodenum Smooth Muscle Duodenum

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