Variant report

Variant rs17792773
Chromosome Location chr6:76428495-76428496
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:76397400-76430800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr6:76409000-76430800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr6:76416000-76428600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr6:76418400-76430600 Weak transcription Gastric stomach
5 chr6:76420600-76432800 Weak transcription NHLF lung
6 chr6:76421000-76429000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr6:76421800-76429000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr6:76422600-76433800 Weak transcription Brain Substantia Nigra brain
9 chr6:76422800-76430400 Weak transcription Thymus Thymus
10 chr6:76422800-76433200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:76423000-76430000 Weak transcription Fetal Intestine Small intestine
12 chr6:76424600-76429000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:76424600-76429000 Weak transcription HepG2 liver
14 chr6:76424600-76429600 Weak transcription Stomach Smooth Muscle stomach
15 chr6:76424600-76433400 Weak transcription Left Ventricle heart
16 chr6:76424800-76428600 Weak transcription Colon Smooth Muscle Colon
17 chr6:76424800-76430000 Weak transcription Fetal Brain Female brain
18 chr6:76425000-76429800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr6:76425000-76429800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr6:76425000-76430400 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr6:76425000-76430800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr6:76425000-76435800 Weak transcription Ovary ovary
23 chr6:76425200-76430400 Weak transcription Primary T cells from cord blood blood
24 chr6:76425200-76430400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr6:76425200-76433400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:76425400-76429200 Weak transcription HSMMtube muscle
27 chr6:76425400-76430000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:76425400-76430200 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr6:76425400-76430800 Weak transcription GM12878-XiMat blood
30 chr6:76425400-76432800 Weak transcription Fetal Muscle Trunk muscle
31 chr6:76425400-76437200 Weak transcription Fetal Intestine Large intestine
32 chr6:76425400-76446200 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr6:76425600-76430400 Weak transcription HMEC breast
34 chr6:76425800-76433200 Weak transcription H1 Cell Line embryonic stem cell
35 chr6:76426000-76428600 Weak transcription Muscle Satellite Cultured Cells --
36 chr6:76426200-76430400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr6:76426200-76433000 Weak transcription Adipose Nuclei Adipose
38 chr6:76426400-76429000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:76426400-76434000 Weak transcription Fetal Lung lung
40 chr6:76426800-76428600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:76426800-76429200 Weak transcription Liver Liver
42 chr6:76427000-76429200 Weak transcription Primary monocytes fromperipheralblood blood
43 chr6:76427200-76428600 Enhancers HUVEC blood vessel
44 chr6:76427200-76429000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr6:76427200-76429200 Weak transcription NH-A brain
46 chr6:76427200-76429600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr6:76427400-76428600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr6:76427400-76429200 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr6:76427600-76429200 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr6:76427800-76429400 Weak transcription Primary neutrophils fromperipheralblood blood

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