Variant report

Variant	rs9380455
Chromosome Location	chr6:34690778-34690779
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:34681066..34682821-chr6:34689773..34692489,2	K562	blood:
2	chr6:34690459..34693304-chr6:34723664..34726438,2	K562	blood:
3	chr6:34689130..34691156-chr6:34693829..34696616,2	K562	blood:

Variant related genes	Relation type
ENSG00000124562	Chromatin interaction

Extended variants
information (count: 172 )
Associated
traits (count: 21 )

rSNPs within LD-proxies of this variant (count:158)

rs_ID	r²[population]
rs10807141	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs10947531	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];0.93[TSI][hapmap];0.80[YRI][hapmap]
rs11755393	1.00[ASW][hapmap];0.81[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs11755420	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.80[YRI][hapmap];0.81[ASN][1000 genomes]
rs11757370	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.80[YRI][hapmap];0.81[ASN][1000 genomes]
rs11759151	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12201281	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13220394	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.81[JPT][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs16895035	0.83[LWK][hapmap]
rs188190	0.93[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.97[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap]
rs1998702	0.83[AMR][1000 genomes]
rs2038841	0.82[AMR][1000 genomes]
rs205260	0.96[CEU][hapmap];0.91[CHB][hapmap]
rs205262	0.93[ASW][hapmap];0.82[LWK][hapmap]
rs205283	0.88[CEU][hapmap]
rs205286	0.96[CEU][hapmap];0.95[CHB][hapmap];0.90[JPT][hapmap];0.80[YRI][hapmap]
rs2235568	0.91[CEU][hapmap];0.91[CHB][hapmap];0.83[YRI][hapmap]
rs2235569	0.86[ASW][hapmap];0.92[CEU][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.93[LWK][hapmap];0.87[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap]
rs2296360	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2395598	1.00[CEU][hapmap];0.95[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap]
rs2395604	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2477507	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2477508	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2492860	0.92[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2492861	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2744943	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap]
rs2744944	0.89[AFR][1000 genomes]
rs2744949	0.93[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap]
rs2744957	1.00[CEU][hapmap];0.95[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap]
rs2744961	0.86[ASW][hapmap];1.00[CEU][hapmap];0.87[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs2744974	0.93[ASW][hapmap];0.95[CEU][hapmap];0.86[CHB][hapmap];0.86[CHD][hapmap];1.00[GIH][hapmap];0.97[LWK][hapmap];0.81[MEX][hapmap];0.98[MKK][hapmap];0.93[TSI][hapmap];0.80[YRI][hapmap]
rs2764197	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2764198	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2764199	0.82[GIH][hapmap]
rs2764201	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2764206	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2764207	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.84[AMR][1000 genomes]
rs2764208	0.81[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.81[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap];0.84[AMR][1000 genomes]
rs2764210	0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2764211	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2814942	0.96[CEU][hapmap];0.91[CHB][hapmap];0.90[JPT][hapmap]
rs2814945	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap]
rs2814947	0.87[ASW][hapmap];1.00[CEU][hapmap];0.83[CHB][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs2814951	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2814952	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2814953	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2814955	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2814956	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2814957	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2814958	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2814959	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2814961	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2814963	0.91[CHB][hapmap];0.95[JPT][hapmap];0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2814966	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2814967	0.84[AMR][1000 genomes]
rs2814968	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.80[YRI][hapmap];0.84[AMR][1000 genomes]
rs2814969	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2814970	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2814971	1.00[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.81[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs2814972	0.87[CEU][hapmap];0.91[CHB][hapmap];0.80[YRI][hapmap]
rs2814976	0.91[CHB][hapmap];0.80[YRI][hapmap]
rs2814981	0.93[ASW][hapmap];0.96[CEU][hapmap];0.91[CHB][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];0.97[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap]
rs2814984	0.93[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.97[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap]
rs2814992	1.00[ASW][hapmap];1.00[CEU][hapmap];0.87[CHB][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap]
rs2815004	1.00[CEU][hapmap];0.95[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap]
rs28675115	0.82[AMR][1000 genomes]
rs34493158	0.83[AMR][1000 genomes]
rs3734259	0.83[LWK][hapmap]
rs3734264	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.93[LWK][hapmap];0.81[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs3734268	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.80[YRI][hapmap];0.82[AMR][1000 genomes]
rs3798352	0.87[CEU][hapmap];0.82[AMR][1000 genomes]
rs3800453	0.83[LWK][hapmap]
rs3800458	0.92[CEU][hapmap]
rs412392	0.96[CEU][hapmap];0.86[CHB][hapmap]
rs4259246	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs4513788	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs58671447	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs58843872	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs59162539	0.80[ASN][1000 genomes]
rs6457788	0.81[AMR][1000 genomes]
rs6457789	0.82[AMR][1000 genomes]
rs6457792	0.85[MKK][hapmap]
rs6457795	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs6457796	1.00[ASW][hapmap];0.86[LWK][hapmap];0.81[MEX][hapmap];0.90[MKK][hapmap];0.80[YRI][hapmap]
rs6899938	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs6900188	0.82[AMR][1000 genomes]
rs6900847	0.81[AMR][1000 genomes]
rs6906129	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.87[GIH][hapmap];0.90[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs6906759	0.82[AMR][1000 genomes]
rs6907244	0.82[AMR][1000 genomes]
rs6912327	1.00[ASW][hapmap];0.87[CHB][hapmap];0.81[JPT][hapmap];0.93[LWK][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs6924898	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs6929567	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6932930	0.82[GIH][hapmap]
rs6937314	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs6942040	0.81[ASN][1000 genomes]
rs7341253	1.00[CEU][hapmap];0.84[YRI][hapmap];0.83[AMR][1000 genomes]
rs7341267	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes]
rs7341329	0.83[AMR][1000 genomes]
rs7739766	0.82[AMR][1000 genomes]
rs7739771	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.94[MEX][hapmap];0.84[MKK][hapmap];0.98[TSI][hapmap]
rs7741398	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7741437	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes]
rs7742652	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7745097	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs7752060	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7755926	1.00[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs7755982	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.82[AMR][1000 genomes]
rs7756009	0.82[AMR][1000 genomes]
rs7756405	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.87[MEX][hapmap];0.90[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap];0.82[AMR][1000 genomes]
rs7758082	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7759128	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7759227	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7763224	0.81[AMR][1000 genomes]
rs7763987	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs7771778	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7774697	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap]
rs7776219	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs912716	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs9296127	0.82[AMR][1000 genomes]
rs9296129	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap]
rs9348950	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs9357181	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs9366863	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9368832	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs9380454	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs9462006	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs9462009	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs9462010	0.82[AMR][1000 genomes]
rs9462011	0.82[AMR][1000 genomes]
rs9462015	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.81[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap];0.82[AMR][1000 genomes]
rs9462020	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs9462021	0.82[AMR][1000 genomes]
rs9462022	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[YRI][hapmap];0.81[ASN][1000 genomes]
rs9462026	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.80[YRI][hapmap]
rs9462027	0.85[MKK][hapmap]
rs9469857	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap];0.82[AMR][1000 genomes]
rs9469858	0.82[AMR][1000 genomes]
rs9469859	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs9469861	0.82[AMR][1000 genomes]
rs9469862	0.82[AMR][1000 genomes]
rs9469863	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs9469869	0.83[AMR][1000 genomes]
rs9469870	0.83[AMR][1000 genomes]
rs9469871	0.82[AMR][1000 genomes]
rs9469872	0.83[AMR][1000 genomes]
rs9469879	0.81[AMR][1000 genomes]
rs9469882	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs9469883	0.82[AMR][1000 genomes]
rs9469884	0.82[AMR][1000 genomes]
rs9469885	0.83[AMR][1000 genomes]
rs9469886	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap]
rs9469887	0.83[AMR][1000 genomes]
rs9469909	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap]
rs9469914	1.00[CEU][hapmap];0.95[CHB][hapmap];0.87[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];0.80[YRI][hapmap]
rs9469917	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.85[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs9689820	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs998278	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022844	chr6:34317219-35060519	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv538195	chr6:34317219-35060519	Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	esv2758046	chr6:34382492-34714677	Genic enhancers Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
4	esv2759418	chr6:34382492-34714677	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
5	nsv885785	chr6:34404636-34874002	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
6	nsv1033583	chr6:34471572-34828372	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
7	nsv885793	chr6:34520267-34886436	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
8	nsv830640	chr6:34542489-34714677	Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
9	nsv1032557	chr6:34565802-34802008	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
10	nsv538196	chr6:34565802-34802008	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
11	esv2763967	chr6:34566255-34925463	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
12	nsv1020710	chr6:34607214-34890143	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
13	nsv5255	chr6:34658569-34703563	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
14	nsv508401	chr6:34669708-34710302	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:21)

SNP	Gene	Cis/trans	Tissue	Source
rs9380455	UHRF1BP1	cis	Muscle Skeletal	GTEx
rs9380455	SNRPC	cis	cerebellum	SCAN
rs9380455	CPNE5	cis	cerebellum	SCAN
rs9380455	UHRF1BP1	cis	lung	GTEx
rs9380455	SNRPC	cis	lymphoblastoid	seeQTL
rs9380455	SNRPC	cis	parietal	SCAN
rs9380455	C6orf89	cis	parietal	SCAN
rs9380455	UHRF1BP1	cis	Whole Blood	GTEx
rs9380455	UHRF1BP1	cis	Adipose Subcutaneous	GTEx
rs9380455	UHRF1BP1	cis	parietal	SCAN
rs9380455	UHRF1BP1	cis	cerebellum	SCAN
rs9380455	UHRF1BP1	cis	Esophagus Muscularis	GTEx
rs9380455	UHRF1BP1	cis	Artery Aorta	GTEx
rs9380455	C6orf107	cis	uninvolved skin	skin_eQTL
rs9380455	UHRF1BP1	cis	Stomach	GTEx
rs9380455	PACSIN1	cis	parietal	SCAN
rs9380455	C6orf227	cis	parietal	SCAN
rs9380455	SNRPC	Cis_1M	lymphoblastoid	RTeQTL
rs9380455	UHRF1BP1	cis	Artery Tibial	GTEx
rs9380455	UHRF1BP1	cis	Nerve Tibial	GTEx
rs9380455	C6orf107	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34685600-34691000	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr6:34685600-34691200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr6:34687200-34691000	Weak transcription	HSMMtube	muscle
4	chr6:34687200-34691200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:34687400-34690800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:34687400-34691000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr6:34687400-34691000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr6:34687400-34691000	Weak transcription	HMEC	breast
9	chr6:34687400-34691000	Weak transcription	Osteobl	bone
10	chr6:34688400-34691000	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr6:34688400-34691000	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr6:34688400-34691000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr6:34688400-34691000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
14	chr6:34690000-34691400	Enhancers	Placenta	Placenta
15	chr6:34690200-34691200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr6:34690200-34691400	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr6:34690200-34691400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr6:34690200-34691400	Enhancers	NHEK	skin
19	chr6:34690200-34691600	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr6:34690200-34691600	Enhancers	K562	blood
21	chr6:34690200-34691800	Enhancers	HepG2	liver
22	chr6:34690400-34691000	Enhancers	A549	lung
23	chr6:34690400-34691400	Enhancers	H1 Cell Line	embryonic stem cell
24	chr6:34690400-34691400	Enhancers	HUES64 Cell Line	embryonic stem cell
25	chr6:34690400-34691400	Enhancers	iPS-15b Cell Line	embryonic stem cell
26	chr6:34690600-34691600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr6:34690600-34691600	Enhancers	Hela-S3	cervix

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