Variant report

Variant	rs12201281
Chromosome Location	chr6:34681091-34681092
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:34663129..34665276-chr6:34679494..34681887,3	K562	blood:
2	chr6:34681066..34682821-chr6:34689773..34692489,2	K562	blood:

Variant related genes	Relation type
ENSG00000272288	Chromatin interaction
ENSG00000196821	Chromatin interaction

Extended variants
information (count: 229 )
Associated
traits (count: 11 )

rSNPs within LD-proxies of this variant (count:215)

rs_ID	r²[population]
rs10807141	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10947531	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10947532	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1125340	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1125341	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11754574	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11755393	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11755420	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11757370	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11759151	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11965761	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1201873	0.83[ASN][1000 genomes]
rs1201874	0.83[ASN][1000 genomes]
rs12177835	0.82[EUR][1000 genomes]
rs13198620	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13219589	0.83[EUR][1000 genomes]
rs13220394	0.87[EUR][1000 genomes]
rs1543558	0.92[EUR][1000 genomes]
rs1543559	0.91[EUR][1000 genomes]
rs188190	0.83[ASN][1000 genomes]
rs1886574	0.88[EUR][1000 genomes]
rs1998702	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2038839	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2038840	0.91[EUR][1000 genomes]
rs2038841	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs205259	0.83[ASN][1000 genomes]
rs205286	0.83[ASN][1000 genomes]
rs2296360	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2395598	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2395599	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2395604	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2395606	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2477507	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2477508	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2492860	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2492861	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2744941	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2744943	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2744944	0.93[AFR][1000 genomes];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2744949	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2744957	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2744959	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2744961	0.89[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2744973	0.80[ASN][1000 genomes]
rs2764197	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2764198	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2764201	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2764206	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2764207	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2764208	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2764210	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2764211	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814945	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2814947	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2814949	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2814951	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2814952	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2814953	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2814955	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814956	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2814957	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814958	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814959	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814961	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2814963	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814966	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814967	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2814968	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2814969	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814970	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2814975	0.81[ASN][1000 genomes]
rs2814984	0.86[ASN][1000 genomes]
rs2814987	0.88[ASN][1000 genomes]
rs2814988	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2814991	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2814992	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814995	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2815001	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2815004	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28675115	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34141614	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34493158	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34657938	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3734264	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3734268	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3777752	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3798348	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3798352	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4259246	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4282407	0.83[EUR][1000 genomes]
rs4513788	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4601124	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4624858	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58671447	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58843872	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59162539	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6457787	0.82[AMR][1000 genomes]
rs6457788	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6457789	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6457795	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs66506671	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6899938	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6900188	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6900847	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6905393	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6906129	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6906759	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6907244	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6912327	0.85[ASN][1000 genomes]
rs6919654	0.87[EUR][1000 genomes]
rs6921363	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6924898	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6925623	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6925764	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6929567	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6930036	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6937132	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6937314	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6937784	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6939600	0.81[ASN][1000 genomes]
rs6940395	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6942040	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs71538266	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs71556966	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7341253	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7341267	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7341329	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7739003	0.85[EUR][1000 genomes]
rs7739766	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7739771	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7741398	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7741437	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7742652	0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7745097	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7748203	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7752060	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7752390	0.87[EUR][1000 genomes]
rs7752522	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7755926	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7755982	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7756009	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7756405	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7756949	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7758082	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7759128	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7759227	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7762644	0.81[EUR][1000 genomes]
rs7763224	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7763987	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7768189	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7768759	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7769820	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7769961	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7771778	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7774697	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7776219	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs912716	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9296127	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9296129	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9348950	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9357181	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9366863	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9368830	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9368832	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9380454	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9380455	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9394248	0.81[EUR][1000 genomes]
rs9462006	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9462009	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9462010	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9462011	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9462015	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9462018	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9462019	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9462020	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9462021	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9462022	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9462023	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9462024	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9462026	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9462028	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9462030	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9469857	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9469858	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9469859	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9469861	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9469862	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9469863	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9469866	0.90[EUR][1000 genomes]
rs9469869	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9469870	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9469871	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9469872	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9469878	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9469879	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9469880	0.89[EUR][1000 genomes]
rs9469882	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9469883	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9469884	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9469885	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9469887	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9469889	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9469891	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9469892	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9469893	0.92[EUR][1000 genomes]
rs9469894	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9469899	0.80[ASN][1000 genomes]
rs9469902	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9469905	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9469909	0.87[EUR][1000 genomes]
rs9469914	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9469917	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9689516	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9689820	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs998278	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022844	chr6:34317219-35060519	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv538195	chr6:34317219-35060519	Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	esv2758046	chr6:34382492-34714677	Genic enhancers Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
4	esv2759418	chr6:34382492-34714677	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
5	nsv885785	chr6:34404636-34874002	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
6	nsv1033583	chr6:34471572-34828372	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
7	nsv885793	chr6:34520267-34886436	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
8	nsv830640	chr6:34542489-34714677	Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
9	nsv1032557	chr6:34565802-34802008	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
10	nsv538196	chr6:34565802-34802008	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
11	esv2763967	chr6:34566255-34925463	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
12	nsv1020710	chr6:34607214-34890143	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
13	nsv5255	chr6:34658569-34703563	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
14	nsv508401	chr6:34669708-34710302	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:11)

SNP	Gene	Cis/trans	Tissue	Source
rs12201281	UHRF1BP1	cis	Muscle Skeletal	GTEx
rs12201281	UHRF1BP1	cis	Whole Blood	GTEx
rs12201281	C6orf107	Cis_1M	lymphoblastoid	RTeQTL
rs12201281	UHRF1BP1	cis	Esophagus Muscularis	GTEx
rs12201281	UHRF1BP1	cis	Stomach	GTEx
rs12201281	UHRF1BP1	cis	Adipose Subcutaneous	GTEx
rs12201281	UHRF1BP1	cis	Artery Tibial	GTEx
rs12201281	SNRPC	Cis_1M	lymphoblastoid	RTeQTL
rs12201281	UHRF1BP1	cis	Nerve Tibial	GTEx
rs12201281	UHRF1BP1	cis	Artery Aorta	GTEx
rs12201281	UHRF1BP1	cis	lung	GTEx

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34677800-34683400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr6:34678000-34682000	Weak transcription	Stomach Mucosa	stomach
3	chr6:34678000-34682200	Weak transcription	HepG2	liver
4	chr6:34678000-34682200	Weak transcription	K562	blood
5	chr6:34678000-34683400	Weak transcription	NHEK	skin
6	chr6:34678000-34686800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr6:34678000-34686800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr6:34678200-34683400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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