Variant report

Variant	rs2815004
Chromosome Location	chr6:34636268-34636269
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:34634782..34636401-chr6:34645425..34647062,2	K562	blood:
2	chr6:34626818..34628711-chr6:34634267..34636276,2	MCF-7	breast:

Extended variants
information (count: 178 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:165)

rs_ID	r²[population]
rs10807141	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10947531	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap]
rs11755393	0.81[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap]
rs11755420	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap]
rs11757370	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap]
rs11759151	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11965761	0.80[EUR][1000 genomes]
rs1201873	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1201874	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12201281	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13220394	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[YRI][hapmap]
rs188190	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1998702	0.83[EUR][1000 genomes]
rs2038841	0.82[EUR][1000 genomes]
rs205258	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs205259	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs205260	0.96[CEU][hapmap];0.96[CHB][hapmap];0.86[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs205283	0.88[CEU][hapmap]
rs205286	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2235568	0.92[CEU][hapmap];0.96[CHB][hapmap];0.89[JPT][hapmap];0.84[YRI][hapmap];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2235569	0.92[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2262245	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2263329	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2296360	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap]
rs2395598	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2395599	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2395604	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap]
rs2477507	0.82[EUR][1000 genomes]
rs2477508	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2492860	0.81[EUR][1000 genomes]
rs2492861	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2744941	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2744943	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2744944	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2744949	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2744957	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2744959	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2744961	1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2744973	0.88[JPT][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2744974	0.95[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2764197	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2764198	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2764201	1.00[CEU][hapmap];0.95[CHB][hapmap];0.84[JPT][hapmap];1.00[YRI][hapmap]
rs2764206	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes]
rs2764207	1.00[CEU][hapmap];0.86[CHB][hapmap];0.82[EUR][1000 genomes]
rs2764208	1.00[CEU][hapmap];0.86[CHB][hapmap];0.82[EUR][1000 genomes]
rs2764211	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814942	0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap]
rs2814945	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2814946	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2814947	1.00[CEU][hapmap];0.87[CHB][hapmap];0.84[JPT][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2814949	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2814951	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2814952	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2814953	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2814955	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814956	0.82[EUR][1000 genomes]
rs2814957	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814958	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814959	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814961	0.82[EUR][1000 genomes]
rs2814963	0.87[CHB][hapmap];0.85[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814966	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814967	0.82[EUR][1000 genomes]
rs2814968	1.00[CEU][hapmap];0.87[CHB][hapmap];0.82[EUR][1000 genomes]
rs2814969	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814970	0.96[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814971	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[YRI][hapmap]
rs2814972	0.88[CEU][hapmap];0.96[CHB][hapmap];0.86[JPT][hapmap];0.80[YRI][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2814974	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2814975	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2814976	0.96[CHB][hapmap];0.86[JPT][hapmap];0.80[YRI][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2814978	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2814979	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2814981	0.96[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2814984	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2814987	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2814988	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2814991	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2814992	1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2814995	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2815001	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28675115	0.82[EUR][1000 genomes]
rs34493158	0.83[EUR][1000 genomes]
rs3734264	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap]
rs3734268	1.00[CEU][hapmap];0.87[CHB][hapmap];0.82[EUR][1000 genomes]
rs3798352	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs3800458	0.92[CEU][hapmap]
rs412392	0.96[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4259246	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap]
rs4513788	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs58671447	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs58843872	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6457795	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap]
rs6899938	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6900188	0.81[EUR][1000 genomes]
rs6900847	0.80[EUR][1000 genomes]
rs6906129	0.95[CEU][hapmap];0.95[CHB][hapmap];1.00[YRI][hapmap]
rs6906759	0.83[EUR][1000 genomes]
rs6907244	0.81[EUR][1000 genomes]
rs6912327	0.91[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap]
rs6924898	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap]
rs6929567	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6937314	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap]
rs6937784	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6940395	0.80[EUR][1000 genomes]
rs7341253	1.00[CEU][hapmap]
rs7341267	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[YRI][hapmap];0.83[EUR][1000 genomes]
rs7341329	0.83[EUR][1000 genomes]
rs7739771	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap]
rs7741398	0.80[AFR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7741437	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[YRI][hapmap];0.83[EUR][1000 genomes]
rs7742652	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7745097	1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap]
rs7755926	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes]
rs7755982	1.00[CEU][hapmap];0.87[CHB][hapmap];0.82[EUR][1000 genomes]
rs7756009	0.82[EUR][1000 genomes]
rs7756405	1.00[CEU][hapmap];0.86[CHB][hapmap];0.82[EUR][1000 genomes]
rs7758082	0.81[EUR][1000 genomes]
rs7759128	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7759227	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7763224	0.82[EUR][1000 genomes]
rs7763987	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7771778	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7774697	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap]
rs7776219	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap]
rs912716	0.82[EUR][1000 genomes]
rs9296127	0.82[EUR][1000 genomes]
rs9296129	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap]
rs9348950	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9357181	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9366863	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9368830	0.88[ASN][1000 genomes]
rs9368832	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9380454	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9380455	1.00[CEU][hapmap];0.95[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap]
rs9462006	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9462009	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9462010	0.81[EUR][1000 genomes]
rs9462011	0.81[EUR][1000 genomes]
rs9462015	1.00[CEU][hapmap];0.86[CHB][hapmap];0.82[EUR][1000 genomes]
rs9462020	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9462021	0.81[EUR][1000 genomes]
rs9462022	1.00[CEU][hapmap];0.95[CHB][hapmap];0.83[JPT][hapmap];0.81[YRI][hapmap]
rs9462026	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap]
rs9469835	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9469857	1.00[CEU][hapmap];0.85[CHB][hapmap];0.82[EUR][1000 genomes]
rs9469859	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];0.95[YRI][hapmap];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9469862	0.82[EUR][1000 genomes]
rs9469863	1.00[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9469870	0.83[EUR][1000 genomes]
rs9469871	0.83[EUR][1000 genomes]
rs9469872	0.82[EUR][1000 genomes]
rs9469882	0.81[EUR][1000 genomes]
rs9469883	0.81[EUR][1000 genomes]
rs9469884	0.80[EUR][1000 genomes]
rs9469885	0.81[EUR][1000 genomes]
rs9469886	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap]
rs9469887	0.80[EUR][1000 genomes]
rs9469909	1.00[CEU][hapmap];0.87[CHB][hapmap];0.96[YRI][hapmap]
rs9469914	1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap]
rs9469917	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[YRI][hapmap]
rs9689516	0.80[EUR][1000 genomes]
rs9689820	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs998278	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022844	chr6:34317219-35060519	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv538195	chr6:34317219-35060519	Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	esv2758046	chr6:34382492-34714677	Genic enhancers Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
4	esv2759418	chr6:34382492-34714677	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
5	nsv885785	chr6:34404636-34874002	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
6	nsv1033583	chr6:34471572-34828372	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
7	nsv885793	chr6:34520267-34886436	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
8	nsv830640	chr6:34542489-34714677	Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
9	nsv885794	chr6:34561585-34673149	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
10	nsv1032557	chr6:34565802-34802008	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
11	nsv538196	chr6:34565802-34802008	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
12	esv2763967	chr6:34566255-34925463	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
13	nsv1020710	chr6:34607214-34890143	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs2815004	UHRF1BP1	cis	Nerve Tibial	GTEx
rs2815004	C6orf107	cis	uninvolved skin	skin_eQTL
rs2815004	UHRF1BP1	cis	lung	GTEx
rs2815004	UHRF1BP1	cis	Muscle Skeletal	GTEx
rs2815004	UHRF1BP1	cis	Adipose Subcutaneous	GTEx
rs2815004	C6orf107	Cis_1M	lymphoblastoid	RTeQTL
rs2815004	UHRF1BP1	cis	Stomach	GTEx
rs2815004	UHRF1BP1	cis	Artery Aorta	GTEx
rs2815004	UHRF1BP1	cis	Esophagus Muscularis	GTEx
rs2815004	UHRF1BP1	cis	Artery Tibial	GTEx
rs2815004	SNRPC	Cis_1M	lymphoblastoid	RTeQTL
rs2815004	UHRF1BP1	cis	Whole Blood	GTEx

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34625800-34640600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:34626000-34647600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr6:34626000-34662000	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr6:34626800-34641600	Weak transcription	Stomach Smooth Muscle	stomach
5	chr6:34626800-34662400	Weak transcription	Fetal Muscle Trunk	muscle
6	chr6:34627000-34639000	Weak transcription	Esophagus	oesophagus
7	chr6:34627200-34639000	Weak transcription	Psoas Muscle	Psoas
8	chr6:34628000-34641400	Weak transcription	Gastric	stomach
9	chr6:34630000-34637200	Enhancers	Liver	Liver
10	chr6:34631600-34639400	Enhancers	Primary T helper cells fromperipheralblood	blood
11	chr6:34631800-34638800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr6:34632000-34639800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr6:34632400-34638800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr6:34632600-34639200	Weak transcription	Brain Anterior Caudate	brain
15	chr6:34632600-34639400	Weak transcription	Stomach Mucosa	stomach
16	chr6:34632600-34647400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr6:34632800-34638200	Weak transcription	Primary B cells from cord blood	blood
18	chr6:34632800-34639400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
19	chr6:34632800-34639400	Weak transcription	Duodenum Smooth Muscle	Duodenum
20	chr6:34632800-34639400	Weak transcription	Rectal Smooth Muscle	rectum
21	chr6:34632800-34639400	Weak transcription	HSMM	muscle
22	chr6:34632800-34639600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr6:34632800-34640600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
24	chr6:34632800-34640600	Weak transcription	Brain Substantia Nigra	brain
25	chr6:34632800-34655200	Weak transcription	Fetal Stomach	stomach
26	chr6:34633000-34637200	Weak transcription	NHEK	skin
27	chr6:34633000-34638000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr6:34633000-34639000	Weak transcription	Fetal Thymus	thymus
29	chr6:34633000-34639000	Weak transcription	Right Atrium	heart
30	chr6:34633000-34639000	Weak transcription	Right Ventricle	heart
31	chr6:34633000-34639000	Weak transcription	NHDF-Ad	bronchial
32	chr6:34633000-34639400	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr6:34633000-34639600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr6:34633000-34639800	Weak transcription	Thymus	Thymus
35	chr6:34633000-34662800	Weak transcription	Aorta	Aorta
36	chr6:34633200-34637800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
37	chr6:34633200-34641200	Weak transcription	Brain Hippocampus Middle	brain
38	chr6:34633400-34637800	Weak transcription	Lung	lung
39	chr6:34633400-34638800	Weak transcription	Left Ventricle	heart
40	chr6:34633400-34639000	Weak transcription	Spleen	Spleen
41	chr6:34633400-34639000	Weak transcription	Osteobl	bone
42	chr6:34633400-34639600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr6:34633400-34641400	Weak transcription	Ovary	ovary
44	chr6:34633600-34636400	Weak transcription	Primary T cells fromperipheralblood	blood
45	chr6:34633600-34637200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr6:34633600-34637200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
47	chr6:34633600-34638600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
48	chr6:34633600-34638800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
49	chr6:34633600-34639000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr6:34633600-34639000	Weak transcription	Small Intestine	intestine

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