Variant report

Variant rs9398499
Chromosome Location chr6:119356335-119356336
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119314400-119364400 Weak transcription Fetal Muscle Trunk muscle
2 chr6:119343400-119356400 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr6:119347400-119356400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr6:119352400-119361000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr6:119352800-119357000 Weak transcription H1 Cell Line embryonic stem cell
6 chr6:119354000-119356800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr6:119354000-119361000 Weak transcription H9 Cell Line embryonic stem cell
8 chr6:119355400-119358200 Enhancers HSMM muscle
9 chr6:119355800-119356600 Enhancers ES-I3 Cell Line embryonic stem cell
10 chr6:119355800-119356600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:119355800-119356600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr6:119355800-119356800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr6:119355800-119356800 Enhancers Fetal Intestine Small intestine
14 chr6:119355800-119357000 Enhancers HepG2 liver
15 chr6:119355800-119357400 Enhancers Brain Hippocampus Middle brain
16 chr6:119355800-119357600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:119355800-119358800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr6:119356000-119356400 Active TSS Pancreatic Islets Pancreatic Islet
19 chr6:119356000-119356600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
20 chr6:119356000-119356600 Flanking Active TSS Adipose Nuclei Adipose
21 chr6:119356000-119356600 Enhancers Liver Liver
22 chr6:119356000-119356600 Enhancers Duodenum Smooth Muscle Duodenum
23 chr6:119356000-119356600 Enhancers Fetal Kidney kidney
24 chr6:119356000-119356600 Flanking Active TSS K562 blood
25 chr6:119356000-119356800 Enhancers Brain Anterior Caudate brain
26 chr6:119356000-119356800 Enhancers Ovary ovary
27 chr6:119356000-119357200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
28 chr6:119356000-119357200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
29 chr6:119356000-119357200 Enhancers Fetal Muscle Leg muscle
30 chr6:119356000-119357400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
31 chr6:119356000-119357800 Enhancers Muscle Satellite Cultured Cells --
32 chr6:119356000-119358600 Enhancers Fetal Lung lung
33 chr6:119356200-119356600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
34 chr6:119356200-119356600 Flanking Active TSS Fetal Intestine Large intestine
35 chr6:119356200-119356600 Enhancers Fetal Stomach stomach
36 chr6:119356200-119356800 Enhancers Cortex derived primary cultured neurospheres brain
37 chr6:119356200-119356800 Enhancers Duodenum Mucosa Duodenum
38 chr6:119356200-119356800 Enhancers Placenta Placenta
39 chr6:119356200-119357000 Active TSS iPS-20b Cell Line embryonic stem cell
40 chr6:119356200-119357200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
41 chr6:119356200-119357200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
42 chr6:119356200-119357400 Enhancers HSMMtube muscle

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