Variant report

Variant	rs9447410
Chromosome Location	chr6:75719559-75719560
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12664010	0.80[AFR][1000 genomes]
rs6914245	0.86[AFR][1000 genomes]
rs6918451	0.93[ASN][1000 genomes]
rs6931257	0.94[AMR][1000 genomes]
rs6934506	0.96[ASN][1000 genomes]
rs9293991	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9341507	0.86[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs9443129	0.82[AFR][1000 genomes]
rs9443136	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9443137	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs9447400	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9447409	0.83[AMR][1000 genomes]
rs9447413	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs9447420	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830696	chr6:75538316-75734609	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv970047	chr6:75713017-75721589	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
3	nsv436512	chr6:75715638-75726015	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
4	esv12306	chr6:75718864-75722640	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75707800-75721600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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