Variant report

Variant	rs9464755
Chromosome Location	chr6:15166721-15166722
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11968539	0.83[CEU][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12524343	0.89[CEU][hapmap]
rs13194276	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16876112	0.82[ASW][hapmap];0.84[YRI][hapmap]
rs16876121	0.87[ASN][1000 genomes]
rs1830498	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35020077	0.86[ASN][1000 genomes]
rs59927454	0.86[ASN][1000 genomes]
rs73371668	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73373422	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73373423	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73373435	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73373441	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9383029	0.82[YRI][hapmap]
rs9476752	0.82[JPT][hapmap]
rs9476753	1.00[CHD][hapmap]
rs9476757	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9476759	0.96[YRI][hapmap];0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9476762	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830593	chr6:15049636-15244190	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15166200-15167400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:15166400-15166800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr6:15166400-15170200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr6:15166600-15170000	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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