Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:15156210..15158890-chr6:15211476..15214661,3	K562	blood:
2	chr6:14918253..14920493-chr6:15156735..15158710,2	MCF-7	breast:
3	chr6:15155665..15157322-chr6:15249355..15251263,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11968539	0.89[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13194276	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16876112	0.81[LWK][hapmap];0.92[YRI][hapmap]
rs16876121	0.93[ASN][1000 genomes]
rs1830498	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs35020077	0.94[EUR][1000 genomes]
rs55930114	0.85[ASN][1000 genomes]
rs73371668	0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73373422	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73373423	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73373435	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73373441	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73724749	0.87[ASN][1000 genomes]
rs73724750	0.87[ASN][1000 genomes]
rs9383029	0.80[MKK][hapmap];0.82[YRI][hapmap]
rs9396561	0.81[YRI][hapmap]
rs9464751	0.85[ASN][1000 genomes]
rs9464752	0.89[ASN][1000 genomes]
rs9464755	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9476749	0.87[ASN][1000 genomes]
rs9476750	0.87[ASN][1000 genomes]
rs9476751	0.85[ASN][1000 genomes]
rs9476752	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9476753	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9476759	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9476762	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830593	chr6:15049636-15244190	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1016007	chr6:15099585-15159098	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv2762580	chr6:15105917-15159110	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15154000-15158600	Weak transcription	K562	blood

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