Variant report
Variant | rs9469444 |
---|---|
Chromosome Location | chr6:33483072-33483073 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:33479121..33484420-chr6:33487848..33490096,5 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10214667 | 1.00[EUR][1000 genomes] |
rs11967163 | 1.00[EUR][1000 genomes] |
rs11970477 | 1.00[EUR][1000 genomes] |
rs28488940 | 1.00[EUR][1000 genomes] |
rs28589816 | 1.00[EUR][1000 genomes] |
rs28868935 | 1.00[EUR][1000 genomes] |
rs41271255 | 1.00[EUR][1000 genomes] |
rs55897728 | 1.00[EUR][1000 genomes] |
rs56085633 | 1.00[EUR][1000 genomes] |
rs56122765 | 1.00[EUR][1000 genomes] |
rs56124649 | 1.00[EUR][1000 genomes] |
rs56148814 | 1.00[EUR][1000 genomes] |
rs56226140 | 1.00[EUR][1000 genomes] |
rs56250036 | 1.00[EUR][1000 genomes] |
rs56875788 | 1.00[EUR][1000 genomes] |
rs57104544 | 1.00[EUR][1000 genomes] |
rs57290518 | 1.00[EUR][1000 genomes] |
rs57877240 | 1.00[EUR][1000 genomes] |
rs58043092 | 1.00[EUR][1000 genomes] |
rs58058146 | 1.00[EUR][1000 genomes] |
rs58312523 | 1.00[EUR][1000 genomes] |
rs58566767 | 1.00[EUR][1000 genomes] |
rs59401679 | 1.00[EUR][1000 genomes] |
rs60289279 | 1.00[EUR][1000 genomes] |
rs60854312 | 1.00[EUR][1000 genomes] |
rs60880341 | 1.00[EUR][1000 genomes] |
rs61138871 | 1.00[EUR][1000 genomes] |
rs61163286 | 1.00[EUR][1000 genomes] |
rs61348385 | 1.00[EUR][1000 genomes] |
rs61589902 | 1.00[EUR][1000 genomes] |
rs73402380 | 1.00[EUR][1000 genomes] |
rs73402381 | 1.00[EUR][1000 genomes] |
rs73402386 | 1.00[EUR][1000 genomes] |
rs73412035 | 1.00[EUR][1000 genomes] |
rs73412040 | 1.00[EUR][1000 genomes] |
rs73741826 | 1.00[EUR][1000 genomes] |
rs73741830 | 1.00[EUR][1000 genomes] |
rs73741832 | 1.00[EUR][1000 genomes] |
rs73741833 | 1.00[EUR][1000 genomes] |
rs73741836 | 1.00[EUR][1000 genomes] |
rs73741932 | 1.00[EUR][1000 genomes] |
rs73743206 | 1.00[EUR][1000 genomes] |
rs73743207 | 1.00[EUR][1000 genomes] |
rs7742848 | 1.00[EUR][1000 genomes] |
rs9461859 | 1.00[EUR][1000 genomes] |
rs9461861 | 1.00[EUR][1000 genomes] |
rs9461864 | 0.84[AFR][1000 genomes] |
rs9461865 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9461866 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9461871 | 1.00[EUR][1000 genomes] |
rs9461872 | 1.00[EUR][1000 genomes] |
rs9469408 | 1.00[EUR][1000 genomes] |
rs9469409 | 1.00[EUR][1000 genomes] |
rs9469410 | 1.00[EUR][1000 genomes] |
rs9469415 | 1.00[EUR][1000 genomes] |
rs9469416 | 1.00[EUR][1000 genomes] |
rs9469419 | 1.00[EUR][1000 genomes] |
rs9469421 | 1.00[EUR][1000 genomes] |
rs9469433 | 1.00[EUR][1000 genomes] |
rs9469437 | 1.00[EUR][1000 genomes] |
rs9469441 | 1.00[EUR][1000 genomes] |
rs9469442 | 1.00[EUR][1000 genomes] |
rs9469443 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9469445 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9469446 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9469468 | 1.00[EUR][1000 genomes] |
rs9469473 | 1.00[EUR][1000 genomes] |
rs9469474 | 1.00[EUR][1000 genomes] |
rs9469476 | 1.00[EUR][1000 genomes] |
rs9469477 | 1.00[EUR][1000 genomes] |
rs9469478 | 1.00[EUR][1000 genomes] |
rs9469479 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv830637 | chr6:33329365-33510704 | Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 62 gene(s) | inside rSNPs | diseases |
2 | nsv602832 | chr6:33382241-33520221 | Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 41 gene(s) | inside rSNPs | diseases |
3 | nsv524010 | chr6:33468151-33505981 | Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive region | 5 gene(s) | inside rSNPs | diseases |
4 | nsv528962 | chr6:33480435-33485241 | Active TSS Weak transcription Bivalent Enhancer Enhancers Strong transcription ZNF genes & repeats | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:33480600-33484800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
2 | chr6:33481000-33488000 | Weak transcription | Spleen | Spleen |
3 | chr6:33481400-33491200 | Weak transcription | Right Atrium | heart |