Variant report

Variant	rs9497356
Chromosome Location	chr6:145912819-145912820
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs6570702	1.00[EUR][1000 genomes]
rs7740548	1.00[AFR][1000 genomes]
rs7757714	1.00[AFR][1000 genomes]
rs7763999	0.86[AFR][1000 genomes]
rs9322032	0.86[AFR][1000 genomes]
rs9485006	1.00[AFR][1000 genomes]
rs9485011	1.00[AFR][1000 genomes]
rs9485013	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs9485014	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs9497317	1.00[AFR][1000 genomes]
rs9497321	1.00[AFR][1000 genomes]
rs9497340	1.00[AFR][1000 genomes]
rs9497341	1.00[AFR][1000 genomes]
rs9497351	0.86[AFR][1000 genomes]
rs9497353	1.00[AFR][1000 genomes]
rs9497367	1.00[AFR][1000 genomes]
rs9497369	1.00[AFR][1000 genomes]
rs9497370	1.00[AFR][1000 genomes]
rs9497371	1.00[AFR][1000 genomes]
rs9497372	1.00[AFR][1000 genomes]
rs9497373	1.00[AFR][1000 genomes]
rs9497375	1.00[AFR][1000 genomes]
rs9497377	1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs9497383	1.00[AFR][1000 genomes]
rs9497394	1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs9497397	1.00[AFR][1000 genomes]
rs9497399	1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs9497400	1.00[AFR][1000 genomes]
rs9497409	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886746	chr6:145815949-145920894	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv886747	chr6:145815949-145922777	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv965778	chr6:145910543-145916022	Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145912600-145913000	Enhancers	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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