Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr2:116197533-116197670	HepG2	liver:	n/a	n/a

Variant related genes	Relation type
DPP10	TF binding region

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10496492	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10496496	0.81[ASN][1000 genomes]
rs10496497	0.82[ASN][1000 genomes]
rs13027502	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1517367	0.81[ASN][1000 genomes]
rs1584400	0.82[ASN][1000 genomes]
rs1584401	0.82[ASN][1000 genomes]
rs1584403	0.82[ASN][1000 genomes]
rs1597192	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2012617	0.94[ASN][1000 genomes]
rs2421104	0.83[ASN][1000 genomes]
rs34884623	0.81[ASN][1000 genomes]
rs35393844	0.88[ASN][1000 genomes]
rs35444272	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35511048	0.82[ASN][1000 genomes]
rs4313982	0.83[ASN][1000 genomes]
rs4849399	0.82[ASN][1000 genomes]
rs4849400	0.82[ASN][1000 genomes]
rs60118669	0.83[EUR][1000 genomes]
rs67984587	0.82[ASN][1000 genomes]
rs708647	0.81[CEU][hapmap]
rs708649	0.82[EUR][1000 genomes]
rs7578012	0.87[ASN][1000 genomes]
rs7594524	0.86[ASN][1000 genomes]
rs843405	0.83[EUR][1000 genomes]
rs965536	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874919	chr2:116130709-116219686	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3358207	chr2:116194582-116198780	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases
3	esv2494215	chr2:116196176-116197917	Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
4	nsv1014859	chr2:116196951-116938584	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:116189400-116198800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr2:116194400-116198800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr2:116196600-116203400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr2:116196800-116203400	Weak transcription	Pancreas	Pancrea
5	chr2:116197400-116197800	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr2:116197400-116197800	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr2:116197400-116198000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr2:116197600-116197800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr2:116197600-116198600	Active TSS	HUES6 Cell Line	embryonic stem cell
10	chr2:116197600-116198800	Active TSS	iPS-20b Cell Line	embryonic stem cell

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