Variant report

No.	Distal block	Cell Line	Cell type
1	chr13:52025794..52034237-chr13:52040132..52048046,20	K562	blood:
2	chr13:52025793..52028352-chr13:52043580..52045211,2	MCF-7	breast:
3	chr13:52026056..52028727-chr13:52040719..52045413,5	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs2026527	0.81[ASN][1000 genomes]
rs2274061	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2274929	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3825524	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6561634	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7321642	0.87[EUR][1000 genomes]
rs7333661	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7335141	0.90[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7989674	0.84[ASN][1000 genomes]
rs7996243	0.82[EUR][1000 genomes]
rs9316539	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9526752	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9526754	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9526768	0.81[AFR][1000 genomes]
rs9535645	0.81[EUR][1000 genomes]
rs9535653	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9535669	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9535674	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9535687	0.81[ASN][1000 genomes]
rs9535690	0.83[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs9535692	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9568608	0.88[AFR][1000 genomes];0.81[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs9526765	INTS6	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:52031800-52045400	Weak transcription	Primary B cells from cord blood	blood
2	chr13:52040400-52045000	Weak transcription	HepG2	liver
3	chr13:52041800-52052600	Weak transcription	Pancreas	Pancrea
4	chr13:52044800-52045000	Active TSS	Liver	Liver

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