Variant report

Variant	rs9529576
Chromosome Location	chr13:69984297-69984298
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs17609165	1.00[EUR][1000 genomes]
rs2325188	1.00[CHD][hapmap]
rs7998191	1.00[CHD][hapmap]
rs9317801	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9317803	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9317809	1.00[CHD][hapmap]
rs9317819	0.98[EUR][1000 genomes]
rs9529551	0.84[AMR][1000 genomes]
rs9529577	0.92[EUR][1000 genomes]
rs9529578	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9529590	0.86[EUR][1000 genomes]
rs9541837	0.82[CEU][hapmap]
rs9541889	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9541895	1.00[CHD][hapmap]
rs9541912	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9541941	1.00[EUR][1000 genomes]
rs9541942	1.00[EUR][1000 genomes]
rs9541944	1.00[EUR][1000 genomes]
rs9541945	1.00[EUR][1000 genomes]
rs9541946	0.98[EUR][1000 genomes]
rs9541948	0.98[EUR][1000 genomes]
rs9599464	1.00[EUR][1000 genomes]
rs9599466	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900479	chr13:69824819-69984297	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv900480	chr13:69891861-70027794	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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