Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10932423	0.92[CHB][hapmap];0.92[CHD][hapmap];0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs11680307	0.83[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs11684050	1.00[JPT][hapmap]
rs11690618	1.00[JPT][hapmap]
rs11887531	1.00[JPT][hapmap]
rs12465933	0.80[ASN][1000 genomes]
rs12468336	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs12469791	0.80[ASN][1000 genomes]
rs12473715	0.83[CHB][hapmap];0.83[CHD][hapmap];0.93[JPT][hapmap];0.84[ASN][1000 genomes]
rs13384295	0.81[EUR][1000 genomes]
rs1521655	0.92[JPT][hapmap]
rs1521656	0.83[CHB][hapmap];0.93[JPT][hapmap];0.84[ASN][1000 genomes]
rs1521658	0.83[CHD][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs1568520	0.81[EUR][1000 genomes]
rs17344266	0.93[JPT][hapmap]
rs17344385	1.00[JPT][hapmap]
rs17416263	1.00[JPT][hapmap]
rs17416297	0.92[JPT][hapmap]
rs2371442	1.00[JPT][hapmap]
rs2371475	1.00[JPT][hapmap]
rs2371476	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs2888051	0.93[JPT][hapmap]
rs56351822	0.85[ASN][1000 genomes]
rs6435689	1.00[JPT][hapmap]
rs6435690	1.00[JPT][hapmap]
rs6715314	0.92[JPT][hapmap]
rs6738304	1.00[JPT][hapmap]
rs7426206	1.00[JPT][hapmap]
rs7577530	0.92[JPT][hapmap];0.88[EUR][1000 genomes]
rs7583813	0.83[CEU][hapmap];0.83[CHB][hapmap];0.83[GIH][hapmap];0.92[JPT][hapmap];0.91[MEX][hapmap]
rs9678442	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011572	chr2:212840066-213152279	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv875805	chr2:212891401-213164837	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv875806	chr2:212997024-213211067	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

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