Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10459305	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.94[ASN][1000 genomes]
rs1410644	0.92[ASN][1000 genomes]
rs2039086	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs2039088	0.99[ASN][1000 genomes]
rs28667337	1.00[EUR][1000 genomes]
rs3818590	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9300408	0.92[ASN][1000 genomes]
rs9554392	0.80[ASN][1000 genomes]
rs9554398	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9554399	1.00[EUR][1000 genomes]
rs9554402	1.00[EUR][1000 genomes]
rs9556703	1.00[CEU][hapmap]
rs9556713	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.96[ASN][1000 genomes]
rs9556714	0.99[ASN][1000 genomes]
rs9556715	0.94[ASN][1000 genomes]
rs9556722	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9556725	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9556732	1.00[EUR][1000 genomes]
rs9556734	1.00[EUR][1000 genomes]
rs9556736	1.00[EUR][1000 genomes]
rs9556737	1.00[EUR][1000 genomes]
rs9556738	1.00[EUR][1000 genomes]
rs9556739	1.00[EUR][1000 genomes]
rs9556741	1.00[EUR][1000 genomes]
rs9634496	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832694	chr13:97930561-98137882	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
2	nsv1038798	chr13:98008467-98068130	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:98044600-98059400	Weak transcription	Left Ventricle	heart
2	chr13:98045400-98059400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr13:98057200-98059400	Weak transcription	Psoas Muscle	Psoas

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