Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95306909..95309637-chr13:95310579..95312465,2	K562	blood:

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs12184567	0.85[YRI][hapmap]
rs16949977	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2146822	1.00[ASN][1000 genomes]
rs2226077	1.00[ASN][1000 genomes]
rs2226078	1.00[ASN][1000 genomes]
rs4417425	1.00[ASN][1000 genomes]
rs59149020	1.00[ASN][1000 genomes]
rs61707735	1.00[ASN][1000 genomes]
rs61965606	1.00[ASN][1000 genomes]
rs6492722	1.00[ASN][1000 genomes]
rs6492724	1.00[ASN][1000 genomes]
rs72638354	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72638356	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7318105	1.00[ASN][1000 genomes]
rs7320230	1.00[ASN][1000 genomes]
rs7329965	1.00[ASN][1000 genomes]
rs73546690	1.00[ASN][1000 genomes]
rs7981150	1.00[ASN][1000 genomes]
rs7984105	1.00[ASN][1000 genomes]
rs7985331	0.87[CEU][hapmap];0.89[TSI][hapmap]
rs7989918	1.00[ASN][1000 genomes]
rs7998457	1.00[ASN][1000 genomes]
rs9516431	1.00[ASN][1000 genomes]
rs9516439	1.00[ASN][1000 genomes]
rs9524564	1.00[ASN][1000 genomes]
rs9524575	1.00[ASN][1000 genomes]
rs9524577	1.00[ASN][1000 genomes]
rs9584241	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9584242	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9584243	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9590045	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9590046	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34004	chr13:94906537-95392644	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv832686	chr13:95206742-95400992	Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95309000-95313200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr13:95309600-95312800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr13:95309600-95313200	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr13:95309600-95314600	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr13:95309800-95312400	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr13:95309800-95312400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr13:95309800-95313200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr13:95310000-95318000	Weak transcription	NHEK	skin
9	chr13:95310200-95313200	Weak transcription	NHLF	lung
10	chr13:95310400-95312800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr13:95311000-95314000	Enhancers	K562	blood
12	chr13:95311200-95313600	Enhancers	HUVEC	blood vessel
13	chr13:95311400-95312600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr13:95311400-95314600	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr13:95311800-95313800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr13:95312000-95313400	Enhancers	Cortex derived primary cultured neurospheres	brain

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