Variant report

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs12164864	0.94[ASN][1000 genomes]
rs1333507	0.92[ASN][1000 genomes]
rs1894106	0.82[ASN][1000 genomes]
rs1894107	0.82[ASN][1000 genomes]
rs1945509	0.82[ASN][1000 genomes]
rs1945510	0.82[ASN][1000 genomes]
rs4280113	0.96[ASN][1000 genomes]
rs4303350	0.96[ASN][1000 genomes]
rs4536338	0.96[ASN][1000 genomes]
rs4587830	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4943614	0.82[ASN][1000 genomes]
rs6563638	0.94[ASN][1000 genomes]
rs6563639	0.94[ASN][1000 genomes]
rs6563640	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6563641	0.96[ASN][1000 genomes]
rs7320992	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7329868	0.84[EUR][1000 genomes]
rs7332206	0.82[ASN][1000 genomes]
rs7336199	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7337847	0.96[ASN][1000 genomes]
rs73466004	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9532295	0.82[ASN][1000 genomes]
rs9548472	0.94[ASN][1000 genomes]
rs9548487	0.89[ASN][1000 genomes]
rs9548510	0.96[ASN][1000 genomes]
rs9548511	0.96[ASN][1000 genomes]
rs9548512	0.96[ASN][1000 genomes]
rs9548516	0.82[ASN][1000 genomes]
rs9548517	0.82[ASN][1000 genomes]
rs9594302	0.84[EUR][1000 genomes]
rs9594303	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9603447	0.92[EUR][1000 genomes]
rs9603451	0.84[EUR][1000 genomes]
rs9603452	0.88[EUR][1000 genomes]
rs9603455	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832585	chr13:39233307-39424375	Weak transcription Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	esv2754118	chr13:39347702-40222644	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:39389400-39423000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr13:39394600-39423000	Weak transcription	Fetal Kidney	kidney
3	chr13:39400800-39413400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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