The 2.0 version of rSNPBase

Variant report

Variant rs963720
Chromosome Location chr6:38569561-38569562
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38523000-38571600 Weak transcription HSMMtube muscle
2 chr6:38535800-38578200 Weak transcription Colon Smooth Muscle Colon
3 chr6:38548200-38570800 Weak transcription Fetal Kidney kidney
4 chr6:38549000-38570800 Weak transcription Fetal Intestine Small intestine
5 chr6:38556000-38580400 Weak transcription Ovary ovary
6 chr6:38557400-38571800 Weak transcription Muscle Satellite Cultured Cells --
7 chr6:38557400-38571800 Weak transcription NHDF-Ad bronchial
8 chr6:38557400-38578000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr6:38557800-38571600 Weak transcription HMEC breast
10 chr6:38557800-38572000 Weak transcription NHLF lung
11 chr6:38560600-38570800 Weak transcription Fetal Intestine Large intestine
12 chr6:38560600-38570800 Weak transcription Left Ventricle heart
13 chr6:38560600-38570800 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr6:38560600-38571000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr6:38560600-38571800 Weak transcription HSMM muscle
16 chr6:38560600-38574400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr6:38560800-38570800 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr6:38560800-38571400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr6:38560800-38580000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr6:38560800-38580200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr6:38561400-38577600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:38561400-38578000 Weak transcription Brain Cingulate Gyrus brain
23 chr6:38561600-38571400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr6:38561800-38571600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr6:38561800-38571600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr6:38562000-38570600 Weak transcription Fetal Lung lung
27 chr6:38562000-38570800 Weak transcription Brain Hippocampus Middle brain
28 chr6:38562000-38571800 Weak transcription Rectal Smooth Muscle rectum
29 chr6:38562000-38574600 Weak transcription Fetal Muscle Leg muscle
30 chr6:38562000-38578000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr6:38562200-38570600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr6:38562200-38571200 Weak transcription Liver Liver
33 chr6:38562200-38571600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr6:38562200-38575000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr6:38562200-38580000 Weak transcription Aorta Aorta
36 chr6:38562600-38570600 Weak transcription Duodenum Mucosa Duodenum
37 chr6:38562800-38579800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr6:38564000-38580400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr6:38565000-38574800 Weak transcription Primary T cells fromperipheralblood blood
40 chr6:38565400-38589200 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr6:38565800-38570400 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr6:38565800-38583200 Weak transcription Primary T cells from cord blood blood
43 chr6:38565800-38583600 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr6:38567800-38580400 Weak transcription Right Ventricle heart
45 chr6:38568000-38570800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr6:38568200-38570600 Weak transcription Small Intestine intestine
47 chr6:38568200-38580000 Weak transcription Psoas Muscle Psoas
48 chr6:38568200-38584200 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015