Variant report

(count:4 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr8:124581660-124581810	K562	blood:	n/a	n/a
2	CTCF	chr8:124581710-124581801	K562	blood:	n/a	n/a
3	CTCF	chr8:124581720-124581870	GM12869	blood:	n/a	n/a
4	CTCF	chr8:124581715-124581811	K562	blood:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:124581523..124583761-chr8:124647181..124648699,2	MCF-7	breast:
2	chr8:124575939..124579271-chr8:124581722..124584580,4	MCF-7	breast:
3	chr8:124574833..124579835-chr8:124581420..124586695,7	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FBXO32-2	chr8:124579311-124582785	ucscGeneNc_uc003yqp_1

No data

Variant related genes	Relation type
ENSG00000254113	TF binding region

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10092188	0.95[EUR][1000 genomes]
rs10808526	0.85[ASN][1000 genomes]
rs11780880	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs12541523	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs13256806	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13262816	0.95[EUR][1000 genomes]
rs13267913	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs2385447	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4006406	0.95[EUR][1000 genomes]
rs41319847	0.86[ASN][1000 genomes]
rs4382457	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs4389916	0.95[EUR][1000 genomes]
rs4870856	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57762054	0.83[ASN][1000 genomes]
rs6470157	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs7010236	0.90[EUR][1000 genomes]
rs7816943	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7840558	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7843874	1.00[CEU][hapmap];0.93[CHB][hapmap];0.93[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831450	chr8:124471741-124661359	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124575600-124598600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:124578800-124582800	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr8:124580600-124582000	Enhancers	Fetal Muscle Leg	muscle
4	chr8:124580600-124582400	Enhancers	Psoas Muscle	Psoas
5	chr8:124581400-124582600	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr8:124581400-124583200	Weak transcription	Right Atrium	heart
7	chr8:124581400-124583200	Weak transcription	HSMMtube	muscle
8	chr8:124581400-124584600	Weak transcription	Placenta	Placenta
9	chr8:124581400-124584800	Weak transcription	Esophagus	oesophagus
10	chr8:124581400-124585000	Weak transcription	Adipose Nuclei	Adipose
11	chr8:124581600-124582600	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr8:124581600-124586400	Weak transcription	Fetal Heart	heart

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