Variant report

Variant	rs968594
Chromosome Location	chr15:31618284-31618285
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SIN3AK20	chr15:31618256-31618804	K562	blood:	n/a	n/a
2	POLR2A	chr15:31617635-31619371	HUVEC	blood vessel:	n/a	n/a
3	RAD21	chr15:31618209-31618732	GM12878	blood:	n/a	n/a
4	PBX3	chr15:31618134-31618857	A549	lung:	n/a	n/a
5	HA-E2F1	chr15:31618049-31619568	MCF-7	breast:	n/a	chr15:31618905-31618914 chr15:31618494-31618503 chr15:31618934-31618944 chr15:31618937-31618947 chr15:31618507-31618518 chr15:31618148-31618158 chr15:31618659-31618668
6	POLR2A	chr15:31618082-31619530	HCT-116	colon:	n/a	n/a
7	CHD2	chr15:31617575-31619605	Hela-S3	cervix:	n/a	n/a
8	GATA1	chr15:31618202-31619294	PBDE	blood:	n/a	n/a
9	POLR2A	chr15:31617966-31618733	HUVEC	blood vessel:	n/a	n/a
10	POLR2A	chr15:31615713-31621677	GM12878	blood:	n/a	n/a
11	TCF7L2	chr15:31618075-31619238	PANC-1	pancreas:	n/a	n/a
12	MYC	chr15:31617818-31621124	NB4	blood:	n/a	chr15:31618906-31618916 chr15:31621043-31621052
13	MAZ	chr15:31618082-31619471	HepG2	liver:	n/a	chr15:31618906-31618916
14	POLR2A	chr15:31618077-31619311	U87	brain:	n/a	n/a
15	E2F1	chr15:31617947-31620812	Hela-S3	cervix:	n/a	chr15:31620285-31620294 chr15:31618905-31618914 chr15:31618494-31618503 chr15:31618934-31618944 chr15:31620383-31620393 chr15:31617951-31617960 chr15:31618937-31618947 chr15:31618507-31618518 chr15:31618148-31618158 chr15:31620001-31620010 chr15:31618659-31618668 chr15:31620147-31620157 chr15:31620312-31620321
16	EGR1	chr15:31618214-31619258	HCT-116	colon:	n/a	chr15:31618429-31618439 chr15:31618663-31618676 chr15:31618403-31618413 chr15:31618906-31618919 chr15:31618907-31618917
17	HCFC1	chr15:31618277-31619309	K562	blood:	n/a	n/a
18	MYC	chr15:31618125-31619631	MCF10A-Er-Src	breast:	n/a	chr15:31618906-31618916
19	EGR1	chr15:31618233-31619649	K562	blood:	n/a	chr15:31618429-31618439 chr15:31618663-31618676 chr15:31618403-31618413 chr15:31618906-31618919 chr15:31618907-31618917
20	MAX	chr15:31617666-31619165	SK-N-SH	brain:	n/a	chr15:31618906-31618916 chr15:31617669-31617679
21	POLR2A	chr15:31617143-31619697	MCF10A-Er-Src	breast:	n/a	n/a
22	HEY1	chr15:31618216-31618428	HepG2	liver:	n/a	chr15:31618274-31618289
23	POLR2A	chr15:31618164-31619608	K562	blood:	n/a	n/a
24	POLR2A	chr15:31617697-31619617	HL-60	blood:	n/a	n/a
25	BCLAF1	chr15:31617969-31618750	GM12878	blood:	n/a	chr15:31618149-31618162 chr15:31618360-31618373 chr15:31618099-31618112 chr15:31618424-31618433 chr15:31618661-31618670 chr15:31618494-31618507 chr15:31618416-31618429 chr15:31618212-31618225 chr15:31618612-31618625
26	POLR2A	chr15:31618174-31618777	K562	blood:	n/a	n/a
27	HEY1	chr15:31618141-31619335	HepG2	liver:	n/a	chr15:31618274-31618289 chr15:31619154-31619169 chr15:31619221-31619236 chr15:31619218-31619233 chr15:31618465-31618480
28	SMC3	chr15:31618207-31618335	K562	blood:	n/a	n/a
29	POLR2A	chr15:31617792-31619684	MCF-7	breast:	n/a	n/a
30	POLR2A	chr15:31618194-31619599	K562	blood:	n/a	n/a
31	TAF1	chr15:31618023-31618936	ECC-1	luminal epithelium:	n/a	n/a
32	MAX	chr15:31618148-31619630	K562	blood:	n/a	chr15:31618906-31618916
33	ELF1	chr15:31617857-31619297	GM12878	blood:	n/a	chr15:31618661-31618673 chr15:31618016-31618028 chr15:31618427-31618439 chr15:31618420-31618429 chr15:31617884-31617896 chr15:31618907-31618919 chr15:31618939-31618948 chr15:31618148-31618160
34	YY1	chr15:31618217-31618742	GM12891	blood:	n/a	chr15:31618662-31618671 chr15:31618659-31618668 chr15:31618427-31618441
35	MAZ	chr15:31617784-31621830	K562	blood:	n/a	chr15:31621326-31621336 chr15:31621325-31621336 chr15:31621326-31621335 chr15:31621325-31621335 chr15:31621716-31621726 chr15:31621325-31621336 chr15:31618906-31618916 chr15:31621325-31621334 chr15:31621324-31621337 chr15:31621325-31621335 chr15:31621680-31621690 chr15:31621324-31621337 chr15:31621325-31621336 chr15:31621043-31621052 chr15:31621326-31621336 chr15:31621325-31621336 chr15:31621326-31621335 chr15:31621326-31621335 chr15:31621324-31621337
36	ZKSCAN1	chr15:31618044-31619535	Hela-S3	cervix:	n/a	n/a
37	POLR2A	chr15:31616968-31619705	GM12878	blood:	n/a	n/a
38	SP1	chr15:31618076-31619093	A549	lung:	n/a	chr15:31618707-31618719 chr15:31618905-31618914 chr15:31618367-31618377 chr15:31618732-31618742 chr15:31618708-31618722 chr15:31618904-31618913 chr15:31618732-31618742 chr15:31618903-31618915 chr15:31618904-31618913 chr15:31618710-31618721 chr15:31618903-31618915 chr15:31618335-31618344 chr15:31618904-31618918
39	JUN	chr15:31618174-31619585	K562	blood:	n/a	n/a
40	POLR2A	chr15:31618035-31619311	U87	brain:	n/a	n/a
41	EBF1	chr15:31616991-31619070	GM12878	blood:	n/a	chr15:31617431-31617442
42	POLR2A	chr15:31616803-31619635	GM12878	blood:	n/a	n/a
43	POLR2A	chr15:31618124-31619274	K562	blood:	n/a	n/a
44	TAF1	chr15:31618235-31618731	GM12891	blood:	n/a	n/a
45	NR3C1	chr15:31618224-31619155	A549	lung:	n/a	n/a
46	EGR1	chr15:31618200-31619385	HCT-116	colon:	n/a	chr15:31618429-31618439 chr15:31618663-31618676 chr15:31618403-31618413 chr15:31618906-31618919 chr15:31618907-31618917
47	POLR2A	chr15:31615786-31621591	GM18505	blood:	n/a	n/a
48	SMC3	chr15:31617671-31619132	Hela-S3	cervix:	n/a	chr15:31618038-31618045
49	POLR2A	chr15:31617683-31621042	Hela-S3	cervix:	n/a	n/a
50	RUNX3	chr15:31616832-31619279	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:31618168..31621382-chr15:31631982..31634646,4	MCF-7	breast:
2	chr15:31616992..31619470-chr15:31682984..31685911,2	K562	blood:
3	chr15:31617830..31618662-chr8:43094478..43095043,2	MCF-7	breast:
4	chr15:31507333..31508207-chr15:31618137..31618644,2	MCF-7	breast:
5	chr15:31616920..31619586-chr8:103667733..103670691,2	MCF-7	breast:
6	chr15:31618253..31621608-chr15:31655043..31658553,3	K562	blood:
7	chr15:31618149..31620497-chr15:31657004..31658970,2	MCF-7	breast:

Variant related genes	Relation type
KLF13	TF binding region
ENSG00000155090	Chromatin interaction
ENSG00000169926	Chromatin interaction

Extended variants
information (count: 92 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs55746757	0.83[AMR][1000 genomes]
rs56026888	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56323816	0.83[AMR][1000 genomes]
rs56345334	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56806445	1.00[AMR][1000 genomes]
rs59806222	0.83[AMR][1000 genomes]
rs60067664	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60450596	0.83[AMR][1000 genomes]
rs60836875	0.83[AMR][1000 genomes]
rs60877973	0.83[AMR][1000 genomes]
rs6493585	1.00[AMR][1000 genomes]
rs7161899	0.83[AMR][1000 genomes]
rs7180819	1.00[AMR][1000 genomes]
rs7182887	0.83[AMR][1000 genomes]
rs7183839	0.83[AMR][1000 genomes]
rs73381273	0.83[AMR][1000 genomes]
rs74010606	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74010607	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74010608	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74010609	0.83[AMR][1000 genomes]
rs74010610	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74010611	0.83[AMR][1000 genomes]
rs74010614	0.80[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs74010615	0.83[AMR][1000 genomes]
rs8032404	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:67 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv903831	chr15:30986051-31723279	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
2	nsv1054147	chr15:31014507-31972706	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
3	nsv542306	chr15:31014507-31972706	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
4	nsv932896	chr15:31292475-31730445	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
5	nsv903838	chr15:31452911-31672128	Strong transcription Flanking Active TSS Enhancers Genic enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
6	esv1815415	chr15:31483843-31697213	Genic enhancers Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
7	esv34100	chr15:31496514-31792591	Active TSS Enhancers ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
8	nsv456747	chr15:31537496-31637996	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	nsv568772	chr15:31537496-31637996	Flanking Active TSS Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
10	nsv903840	chr15:31589970-31800149	Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
11	esv1839818	chr15:31594828-31637996	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
12	nsv542318	chr15:31601016-31628938	Genic enhancers Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
13	nsv1050482	chr15:31601016-31672921	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
14	nsv542319	chr15:31605961-31628938	Enhancers Active TSS Genic enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
15	nsv1048082	chr15:31610245-31667000	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
16	nsv1045944	chr15:31610245-31672921	Enhancers Genic enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
17	nsv568773	chr15:31616674-31619868	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
18	esv1814726	chr15:31616674-31620435	Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
19	nsv568774	chr15:31616674-31620943	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
20	nsv516681	chr15:31616674-31675453	Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
21	nsv903841	chr15:31616674-31697242	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
22	esv3322979	chr15:31617060-31621658	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
23	esv3440911	chr15:31617485-31620033	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
24	nsv827280	chr15:31617536-31621947	Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
25	esv3416843	chr15:31617660-31621758	Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
26	nsv568775	chr15:31617788-31619644	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases
27	nsv568776	chr15:31617788-31620435	Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
28	esv12399	chr15:31617831-31621038	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
29	esv1793400	chr15:31617859-31619945	Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
30	esv1799876	chr15:31617859-31619945	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
31	esv1835424	chr15:31617859-31619945	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
32	esv1836672	chr15:31617859-31619945	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
33	esv1824341	chr15:31617859-31621321	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
34	nsv568777	chr15:31617877-31619945	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
35	nsv568778	chr15:31617877-31620286	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
36	esv1792530	chr15:31617877-31620435	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
37	esv1793154	chr15:31617877-31620435	Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
38	esv1796812	chr15:31617877-31620435	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
39	esv1833849	chr15:31617877-31620435	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
40	esv1834982	chr15:31617877-31620435	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
41	esv1835431	chr15:31617877-31620435	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
42	esv1838602	chr15:31617877-31620435	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
43	esv1839960	chr15:31617877-31620435	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
44	esv1844646	chr15:31617877-31620435	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
45	esv1850529	chr15:31617877-31620435	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
46	nsv568779	chr15:31617877-31620435	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
47	nsv568780	chr15:31617877-31620785	Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
48	esv1796996	chr15:31617877-31620943	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
49	esv1797741	chr15:31617877-31620943	Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
50	nsv568781	chr15:31617877-31620943	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:31616800-31618400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
2	chr15:31617200-31621200	Active TSS	Placenta Amnion	Placenta Amnion
3	chr15:31617200-31621800	Active TSS	Left Ventricle	heart
4	chr15:31617400-31621000	Active TSS	NH-A	brain
5	chr15:31617400-31621800	Active TSS	GM12878-XiMat	blood
6	chr15:31617400-31622000	Active TSS	H9 Cell Line	embryonic stem cell
7	chr15:31617400-31622000	Active TSS	Esophagus	oesophagus
8	chr15:31617400-31622400	Active TSS	Gastric	stomach
9	chr15:31617600-31620600	Active TSS	Psoas Muscle	Psoas
10	chr15:31617600-31620800	Active TSS	Skeletal Muscle Female	skeletal muscle
11	chr15:31617600-31621000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
12	chr15:31617600-31621000	Active TSS	Thymus	Thymus
13	chr15:31617600-31621000	Active TSS	A549	lung
14	chr15:31617600-31621200	Active TSS	Aorta	Aorta
15	chr15:31617600-31621200	Active TSS	Right Ventricle	heart
16	chr15:31617600-31621400	Active TSS	Spleen	Spleen
17	chr15:31617600-31621600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr15:31617600-31621600	Active TSS	Sigmoid Colon	Sigmoid Colon
19	chr15:31617600-31621800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr15:31617600-31621800	Active TSS	HUES48 Cell Line	embryonic stem cell
21	chr15:31617600-31621800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr15:31617600-31621800	Active TSS	Primary T killer memory cells from peripheral blood	blood
23	chr15:31617600-31621800	Active TSS	Lung	lung
24	chr15:31617600-31621800	Active TSS	Small Intestine	intestine
25	chr15:31617600-31621800	Active TSS	NHLF	lung
26	chr15:31617600-31622000	Active TSS	Brain Angular Gyrus	brain
27	chr15:31617600-31622000	Active TSS	Fetal Intestine Small	intestine
28	chr15:31617600-31622200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr15:31617600-31622200	Active TSS	Duodenum Smooth Muscle	Duodenum
30	chr15:31617600-31622200	Active TSS	Pancreatic Islets	Pancreatic Islet
31	chr15:31617800-31618600	Active TSS	Fetal Heart	heart
32	chr15:31617800-31619200	Active TSS	Stomach Mucosa	stomach
33	chr15:31617800-31619400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr15:31617800-31619400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr15:31617800-31620400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr15:31617800-31620600	Active TSS	Primary T helper naive cells fromperipheralblood	blood
37	chr15:31617800-31620600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr15:31617800-31620800	Active TSS	Primary neutrophils fromperipheralblood	blood
39	chr15:31617800-31620800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr15:31617800-31620800	Active TSS	Liver	Liver
41	chr15:31617800-31620800	Active TSS	Brain Germinal Matrix	brain
42	chr15:31617800-31620800	Active TSS	Fetal Lung	lung
43	chr15:31617800-31620800	Active TSS	Skeletal Muscle Male	skeletal muscle
44	chr15:31617800-31621000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr15:31617800-31621000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr15:31617800-31621000	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr15:31617800-31621000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr15:31617800-31621000	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
49	chr15:31617800-31621000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr15:31617800-31621000	Active TSS	Muscle Satellite Cultured Cells	--

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