Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10174557	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1155663	0.81[ASN][1000 genomes]
rs12466330	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12474896	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12475000	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs13430426	0.83[AMR][1000 genomes]
rs1402449	0.81[ASN][1000 genomes]
rs1607192	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17044209	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17044293	0.81[ASN][1000 genomes]
rs2001800	0.82[ASN][1000 genomes]
rs56367866	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs66950432	0.90[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs67092650	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67201082	0.80[AMR][1000 genomes]
rs7558115	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7562421	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7569580	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7600222	0.81[AMR][1000 genomes]
rs949888	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001542	chr2:115920847-116082585	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv834339	chr2:115953298-116132979	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:116050800-116068000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr2:116065000-116068600	Enhancers	Primary monocytes fromperipheralblood	blood

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