Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10174557	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10185352	0.82[ASN][1000 genomes]
rs1155663	0.85[ASN][1000 genomes]
rs12466330	0.85[ASN][1000 genomes]
rs12474896	0.86[ASN][1000 genomes]
rs12475000	0.85[ASN][1000 genomes]
rs13430426	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1402448	0.84[ASN][1000 genomes]
rs1402449	0.85[ASN][1000 genomes]
rs1521072	0.82[ASN][1000 genomes]
rs17044209	0.80[ASN][1000 genomes]
rs17044293	0.85[ASN][1000 genomes]
rs2001800	0.86[ASN][1000 genomes]
rs56367866	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs59048337	0.80[ASN][1000 genomes]
rs66950432	0.81[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs67092650	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7558115	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7562421	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7569580	0.95[ASN][1000 genomes]
rs9308712	0.83[ASN][1000 genomes]
rs949888	0.85[ASN][1000 genomes]
rs973176	0.83[ASN][1000 genomes]
rs975454	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834339	chr2:115953298-116132979	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3451356	chr2:116073771-116101275	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:116084000-116085400	Enhancers	Fetal Intestine Large	intestine

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