Variant report

Variant	rs9765890
Chromosome Location	chr6:82642641-82642642
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs16893690	1.00[EUR][1000 genomes]
rs181982	1.00[EUR][1000 genomes]
rs194613	1.00[EUR][1000 genomes]
rs194614	1.00[EUR][1000 genomes]
rs4706911	1.00[EUR][1000 genomes]
rs6905136	1.00[AMR][1000 genomes]
rs6910544	1.00[AMR][1000 genomes]
rs6914373	1.00[AMR][1000 genomes]
rs9294236	1.00[EUR][1000 genomes]
rs9791375	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830712	chr6:82491029-82654531	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82640000-82642800	Weak transcription	HepG2	liver
2	chr6:82640000-82643200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:82640000-82646400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr6:82640200-82647000	Weak transcription	Osteobl	bone
5	chr6:82640400-82649000	Weak transcription	Aorta	Aorta
6	chr6:82641800-82646800	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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