Variant report

Variant	rs9876376
Chromosome Location	chr3:140880856-140880857
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1115182	0.95[EUR][1000 genomes]
rs1115183	0.88[EUR][1000 genomes]
rs12494486	0.81[EUR][1000 genomes]
rs13068771	0.84[EUR][1000 genomes]
rs1511385	0.81[EUR][1000 genomes]
rs1533129	0.81[EUR][1000 genomes]
rs1912730	0.87[EUR][1000 genomes]
rs1949114	0.81[EUR][1000 genomes]
rs2127098	0.86[EUR][1000 genomes]
rs2169867	0.90[EUR][1000 genomes]
rs2311499	0.87[EUR][1000 genomes]
rs2871782	0.85[EUR][1000 genomes]
rs4683567	0.81[EUR][1000 genomes]
rs4683571	0.82[EUR][1000 genomes]
rs6776346	0.81[EUR][1000 genomes]
rs6800524	0.82[EUR][1000 genomes]
rs6809691	0.90[EUR][1000 genomes]
rs7613134	0.81[EUR][1000 genomes]
rs9289620	0.82[EUR][1000 genomes]
rs985627	0.84[EUR][1000 genomes]
rs995782	0.81[EUR][1000 genomes]
rs995784	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877550	chr3:140867094-140933231	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:140878000-140882000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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