Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10048645	0.83[AFR][1000 genomes]
rs10169561	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10189808	0.83[AFR][1000 genomes]
rs1115013	0.84[ASN][1000 genomes]
rs11687634	0.84[ASN][1000 genomes]
rs11692794	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11889907	0.84[ASN][1000 genomes]
rs12693197	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12991282	0.81[AFR][1000 genomes]
rs13000027	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13012946	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13021168	0.84[ASN][1000 genomes]
rs13022986	0.84[ASN][1000 genomes]
rs1581175	0.84[ASN][1000 genomes]
rs1606814	0.84[ASN][1000 genomes]
rs1606816	0.84[ASN][1000 genomes]
rs2138195	0.84[ASN][1000 genomes]
rs2176061	0.83[AFR][1000 genomes]
rs4511690	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4894113	0.84[ASN][1000 genomes]
rs56219418	0.84[ASN][1000 genomes]
rs6717795	0.84[ASN][1000 genomes]
rs6728581	0.94[ASN][1000 genomes]
rs7425514	0.81[AFR][1000 genomes]
rs872158	0.84[ASN][1000 genomes]
rs872159	0.84[ASN][1000 genomes]
rs872160	0.84[ASN][1000 genomes]
rs979901	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs988289	0.83[AFR][1000 genomes]
rs988290	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875471	chr2:180448523-180469778	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180461400-180470400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr2:180463200-180467600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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