The 2.0 version of rSNPBase

Variant report

Variant rs9970950
Chromosome Location chr1:172631460-172631461
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172624000-172631800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr1:172624200-172640600 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:172624400-172631600 Weak transcription NHEK skin
4 chr1:172624400-172631800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:172624600-172631600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:172626800-172632800 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr1:172627200-172631800 Enhancers Primary T cells from cord blood blood
8 chr1:172627400-172632400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:172627800-172631800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
10 chr1:172628400-172631600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:172628400-172631600 Weak transcription K562 blood
12 chr1:172628800-172631600 Enhancers Primary T regulatory cells fromperipheralblood blood
13 chr1:172628800-172639400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:172629800-172631800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr1:172629800-172632000 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr1:172630200-172631800 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:172630400-172632400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
18 chr1:172630600-172631600 Weak transcription Duodenum Mucosa Duodenum
19 chr1:172630600-172632000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
20 chr1:172631000-172631600 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr1:172631000-172632400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
22 chr1:172631000-172632600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
23 chr1:172631200-172631600 Enhancers GM12878-XiMat blood
24 chr1:172631200-172632000 Active TSS Primary mononuclear cells fromperipheralblood Blood
25 chr1:172631200-172632000 Flanking Active TSS Dnd41 blood
26 chr1:172631200-172632200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
27 chr1:172631200-172632800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:172631200-172633000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:172631200-172633200 Enhancers HMEC breast
30 chr1:172631400-172631800 Enhancers Monocytes-CD14+_RO01746 blood
31 chr1:172631400-172632200 Enhancers Primary B cells from peripheral blood blood
32 chr1:172631400-172632200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
33 chr1:172631400-172632200 Bivalent Enhancer Fetal Thymus thymus
34 chr1:172631400-172632600 Enhancers Primary monocytes fromperipheralblood blood
35 chr1:172631400-172632600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:172631400-172632600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:172631400-172632800 Flanking Active TSS Primary T cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015