Variant report

Variant	rs10056855
Chromosome Location	chr5:68175408-68175409
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:68174097..68175600-chr5:68177826..68180032,2	MCF-7	breast:

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10039488	0.84[EUR][1000 genomes]
rs10039512	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10041293	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10056434	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10067045	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10077547	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10471758	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10940179	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10940180	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10940181	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10940182	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12153013	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12234010	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13165901	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1427906	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1427907	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2913286	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2913287	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2913288	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2913289	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2913290	0.84[EUR][1000 genomes]
rs2913291	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2913292	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2913293	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2913294	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2972426	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2972427	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2972428	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3097142	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3112432	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4246758	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4246760	0.95[EUR][1000 genomes]
rs4280829	0.95[EUR][1000 genomes]
rs4418057	0.91[EUR][1000 genomes]
rs4541611	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4626296	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4976051	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6869950	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6877035	0.86[EUR][1000 genomes]
rs7702480	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7715545	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7737876	0.94[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68172400-68178200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood

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