Variant report

Variant	rs6877035
Chromosome Location	chr5:68145539-68145540
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:68144075..68146738-chr5:68150083..68152824,2	K562	blood:
2	chr5:68143627..68146263-chr5:68146976..68149088,2	K562	blood:
3	chr5:68144763..68146279-chr5:68146550..68148476,2	K562	blood:

Variant related genes	Relation type
ENSG00000250289	Chromatin interaction

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs10039488	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10039512	0.94[EUR][1000 genomes]
rs10041293	0.83[EUR][1000 genomes]
rs10056434	0.92[EUR][1000 genomes]
rs10056855	0.86[EUR][1000 genomes]
rs10067045	0.89[CEU][hapmap];0.95[EUR][1000 genomes]
rs10076002	0.92[CEU][hapmap]
rs10076159	0.88[CEU][hapmap]
rs10077547	0.91[EUR][1000 genomes]
rs10471758	0.88[CEU][hapmap];0.95[EUR][1000 genomes]
rs10940179	0.93[EUR][1000 genomes]
rs10940180	0.92[EUR][1000 genomes]
rs10940181	0.92[EUR][1000 genomes]
rs10940182	0.93[EUR][1000 genomes]
rs12153013	0.93[EUR][1000 genomes]
rs12234010	0.95[EUR][1000 genomes]
rs13165901	0.89[EUR][1000 genomes]
rs1427906	0.93[EUR][1000 genomes]
rs1427907	0.90[EUR][1000 genomes]
rs1582897	0.81[EUR][1000 genomes]
rs1820643	0.81[EUR][1000 genomes]
rs2888407	0.86[EUR][1000 genomes]
rs2913280	0.85[EUR][1000 genomes]
rs2913285	0.81[EUR][1000 genomes]
rs2913286	0.92[EUR][1000 genomes]
rs2913287	0.93[EUR][1000 genomes]
rs2913288	0.93[EUR][1000 genomes]
rs2913289	0.94[EUR][1000 genomes]
rs2913290	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2913291	0.94[EUR][1000 genomes]
rs2913292	0.94[EUR][1000 genomes]
rs2913293	0.94[EUR][1000 genomes]
rs2913294	0.94[EUR][1000 genomes]
rs2972421	0.86[EUR][1000 genomes]
rs2972426	0.93[EUR][1000 genomes]
rs2972427	0.93[EUR][1000 genomes]
rs2972428	0.94[EUR][1000 genomes]
rs3097142	0.94[EUR][1000 genomes]
rs3112432	0.94[EUR][1000 genomes]
rs4246758	0.92[EUR][1000 genomes]
rs4246760	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4280829	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4418057	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4541611	0.84[EUR][1000 genomes]
rs4626296	0.93[EUR][1000 genomes]
rs4976051	0.89[EUR][1000 genomes]
rs6869950	0.82[EUR][1000 genomes]
rs6887308	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7702480	0.94[EUR][1000 genomes]
rs7715545	0.83[EUR][1000 genomes]
rs7737876	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68143400-68145600	Enhancers	HSMMtube	muscle
2	chr5:68143600-68146000	Enhancers	NHDF-Ad	bronchial
3	chr5:68143800-68146000	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr5:68145200-68145600	Enhancers	Placenta Amnion	Placenta Amnion

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