Variant report

Variant	rs10093669
Chromosome Location	chr8:91609780-91609781
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91597092..91599824-chr8:91609120..91610741,2	K562	blood:
2	chr8:91609545..91612021-chr8:91659407..91661702,2	MCF-7	breast:
3	chr8:91608952..91611383-chr8:91612530..91614515,2	MCF-7	breast:
4	chr8:91609115..91611935-chr8:91655892..91659054,3	MCF-7	breast:
5	chr8:91601386..91604181-chr8:91608873..91611046,2	MCF-7	breast:
6	chr8:91608309..91610811-chr8:91640796..91643041,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000180694	Chromatin interaction
ENSG00000246792	Chromatin interaction

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:67)

rs_ID	r²[population]
rs10046720	0.84[AMR][1000 genomes]
rs10086275	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10087211	0.98[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs10092300	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10092582	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10094321	0.84[AMR][1000 genomes]
rs10095430	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10096820	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10098293	0.84[AMR][1000 genomes]
rs10098726	0.84[AMR][1000 genomes]
rs10101828	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10101918	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10103494	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10103796	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10105322	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10106913	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10111672	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10113048	0.84[AMR][1000 genomes]
rs10282840	0.97[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs10283082	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10283102	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10504896	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16904906	0.84[AMR][1000 genomes]
rs16904915	0.84[AMR][1000 genomes]
rs16905034	0.84[AMR][1000 genomes]
rs16905035	0.84[AMR][1000 genomes]
rs16905036	0.84[AMR][1000 genomes]
rs28457745	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28489185	0.84[AMR][1000 genomes]
rs28495879	0.84[AMR][1000 genomes]
rs28525018	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28529000	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28552751	0.84[AMR][1000 genomes]
rs28557468	0.84[AMR][1000 genomes]
rs28620201	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28623085	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28624189	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28631038	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28644172	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28654367	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28669236	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28680836	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28690036	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28709775	0.98[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs28712771	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56021347	0.84[AMR][1000 genomes]
rs56061891	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56187777	0.84[AMR][1000 genomes]
rs73692314	0.84[AMR][1000 genomes]
rs73692315	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692316	0.84[AMR][1000 genomes]
rs73692438	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692439	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692448	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692449	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692450	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692452	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692453	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692470	0.84[AMR][1000 genomes]
rs73692595	0.84[AMR][1000 genomes]
rs73692598	0.84[AMR][1000 genomes]
rs73692602	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694003	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694004	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694005	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9297873	0.84[AMR][1000 genomes]
rs9297878	0.84[AMR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91594600-91621600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:91606600-91610400	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr8:91606600-91621800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:91606600-91627600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr8:91609400-91610000	Enhancers	Primary T helper cells PMA-I stimulated	--
6	chr8:91609600-91610000	Enhancers	Primary T cells from cord blood	blood
7	chr8:91609600-91610000	Enhancers	Primary T killer memory cells from peripheral blood	blood

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