Variant report

Variant	rs10283082
Chromosome Location	chr8:91616516-91616517
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91613706..91617129-chr8:91645258..91647811,3	K562	blood:
2	chr8:91614062..91617151-chr8:91620132..91623059,3	K562	blood:
3	chr8:91613334..91617171-chr8:91619742..91623247,5	MCF-7	breast:
4	chr8:91585567..91587123-chr8:91615418..91617275,2	MCF-7	breast:

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:67)

rs_ID	r²[population]
rs10046720	0.84[AMR][1000 genomes]
rs10086275	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10087211	0.98[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs10092300	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10092582	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10093669	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10094321	0.84[AMR][1000 genomes]
rs10095430	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10096820	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10098293	0.84[AMR][1000 genomes]
rs10098726	0.84[AMR][1000 genomes]
rs10101828	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10101918	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10103494	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10103796	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10105322	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10106913	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10111672	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10113048	0.84[AMR][1000 genomes]
rs10282840	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs10283102	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10504896	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16904906	0.84[AMR][1000 genomes]
rs16904915	0.84[AMR][1000 genomes]
rs16905034	0.84[AMR][1000 genomes]
rs16905035	0.84[AMR][1000 genomes]
rs16905036	0.84[AMR][1000 genomes]
rs28457745	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28489185	0.84[AMR][1000 genomes]
rs28495879	0.84[AMR][1000 genomes]
rs28525018	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28529000	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28552751	0.84[AMR][1000 genomes]
rs28557468	0.84[AMR][1000 genomes]
rs28620201	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28623085	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28624189	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28631038	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28644172	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28654367	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28669236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28680836	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28690036	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28709775	0.98[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs28712771	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56021347	0.84[AMR][1000 genomes]
rs56061891	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56187777	0.84[AMR][1000 genomes]
rs73692314	0.84[AMR][1000 genomes]
rs73692315	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692316	0.84[AMR][1000 genomes]
rs73692438	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692439	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692448	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692449	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692450	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692452	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692453	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692470	0.84[AMR][1000 genomes]
rs73692595	0.84[AMR][1000 genomes]
rs73692598	0.84[AMR][1000 genomes]
rs73692602	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694003	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694004	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694005	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9297873	0.84[AMR][1000 genomes]
rs9297878	0.84[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91594600-91621600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:91606600-91621800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:91606600-91627600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr8:91614400-91621200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:91614600-91618800	Weak transcription	Pancreas	Pancrea
6	chr8:91616200-91618000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links